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SSRP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.3 nTPM
HPA:39.3 nTPM
GTEx:36.5 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:34.0 nTPM
Mouse:73.0 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002697
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
1898 Male, age 80, left hemisphere 39.5
2621 Female, age 67, right hemisphere 39.3
2148 Female, age 91, left hemisphere 39.0
1855 Male, age 76, left hemisphere 37.5
2529 Female, age 94, left hemisphere 37.5
1911 Female, age 85, right hemisphere 36.7
Dentate gyrus
nTPM: 38.3
1927 Female, age 91, both hemispheres 39.8
2530 Female, age 94, left hemisphere 39.5
2531 Female, age 67, both hemispheres 39.0
2010 Male, age 76, both hemispheres 37.9
2246 Female, age 85, both hemispheres 37.4
2528 Male, age 74, both hemispheres 36.1
Entorhinal gyrus
nTPM: 37.3
1938 Female, age 85, left hemisphere 38.5
2764 Male, age 80, right hemisphere 38.5
1787 Male, age 76, left hemisphere 38.2
2117 Female, age 91, right hemisphere 36.5
2686 Male, age 75, right hemisphere 36.2
2613 Female, age 94, left hemisphere 36.1
Hippocampus, CA1
nTPM: 39.3
2749 Male, age 80, left hemisphere 41.3
1873 Female, age 85, both hemispheres 41.2
2045 Male, age 76, both hemispheres 40.7
2527 Male, age 74, both hemispheres 36.9
2082 Female, age 91, right hemisphere 36.2
Hippocampus, CA2
nTPM: 38.1
1892 Male, age 76, both hemispheres 40.9
1963 Male, age 80, left hemisphere 39.9
1940 Female, age 85, left hemisphere 37.8
2249 Male, age 74, both hemispheres 36.9
2437 Female, age 94, left hemisphere 36.9
2113 Female, age 91, right hemisphere 36.3
Hippocampus, CA3
nTPM: 38.3
2620 Female, age 94, left hemisphere 41.0
2861 Female, age 67, both hemispheres 38.9
1867 Male, age 76, both hemispheres 38.8
2137 Male, age 80, left hemisphere 38.7
1891 Female, age 85, both hemispheres 37.3
2436 Male, age 74, both hemispheres 35.3
Parahippocampal cortex
nTPM: 37.4
2532 Female, age 72, left hemisphere 40.0
1850 Male, age 80, both hemispheres 39.4
1933 Female, age 85, both hemispheres 37.9
2018 Male, age 76, both hemispheres 37.8
2245 Female, age 91, both hemispheres 37.4
2250 Female, age 67, right hemisphere 37.4
2622 Female, age 67, right hemisphere 37.4
1990 Female, age 91, right hemisphere 36.1
2692 Male, age 74, both hemispheres 36.0
2693 Female, age 94, both hemispheres 34.8
Perirhinal gyrus
nTPM: 39.2
1794 Male, age 80, right hemisphere 40.1
1841 Female, age 85, right hemisphere 40.0
1847 Female, age 91, left hemisphere 40.0
2848 Male, age 76, right hemisphere 39.0
2521 Female, age 94, right hemisphere 37.0
Subiculum
nTPM: 36.8
1977 Female, age 85, both hemispheres 37.9
1901 Male, age 80, both hemispheres 37.3
2438 Female, age 94, left hemisphere 37.1
2619 Male, age 74, both hemispheres 36.8
2042 Male, age 76, both hemispheres 35.9
2729 Female, age 91, right hemisphere 35.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.5
Samples: 197

Max nTPM: 50.3
Min nTPM: 27.4
Std nTPM: 4.5
Median nTPM: 35.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 50.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 49.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 49.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 48.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 47.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 46.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 45.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.5
FF:10153-102I9 76 years, female 35.9
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.0
Samples: 4

Max nTPM: 37.0
Min nTPM: 30.5
Sample A Female 37.0
Sample B Female 33.7
Sample C Male 34.8
Sample D Male 30.5
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 33.5
Min nTPM: 27.8
Sample A Female 29.9
Sample B Female 33.5
Sample C Male 32.9
Sample D Male 27.8
Subiculum
nTPM: 31.3
Samples: 4

Max nTPM: 37.1
Min nTPM: 28.8
Sample A Female 37.1
Sample B Female 29.2
Sample C Male 28.8
Sample D Male 30.1
Ventral hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 38.4
Min nTPM: 24.8
Sample A Female 27.6
Sample B Female 24.8
Sample C Male 38.4
Sample D Male 35.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.8
Samples: 4

Max nTPM: 67.8
Min nTPM: 62.8
Sample A Male 62.8
Sample B Male 65.6
Sample C Female 67.1
Sample D Female 67.8
Hippocampal formation
nTPM: 73.0
Samples: 4

Max nTPM: 75.4
Min nTPM: 71.0
Sample A Male 71.0
Sample B Male 73.1
Sample C Female 75.4
Sample D Female 72.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
74819346 Antisense, RP_060315_02_F01, Mouse strain C57BL/6J (56 days, male) 10.5
69838048 Antisense, RP_050224_01_H02, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.