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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:46.1 nTPM
HPA:46.1 nTPM
GTEx:38.3 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:3.3 nTPM
Mouse:37.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035063Antibody HPA035064
Glial cells LowLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.0
1898 Male, age 80, left hemisphere 47.4
2529 Female, age 94, left hemisphere 45.7
1911 Female, age 85, right hemisphere 45.4
1855 Male, age 76, left hemisphere 44.2
2621 Female, age 67, right hemisphere 43.9
2148 Female, age 91, left hemisphere 43.3
Dentate gyrus
nTPM: 45.2
2010 Male, age 76, both hemispheres 46.4
2528 Male, age 74, both hemispheres 46.3
1927 Female, age 91, both hemispheres 45.8
2530 Female, age 94, left hemisphere 44.9
2246 Female, age 85, both hemispheres 44.4
2531 Female, age 67, both hemispheres 43.6
Entorhinal gyrus
nTPM: 44.3
2117 Female, age 91, right hemisphere 45.6
1787 Male, age 76, left hemisphere 45.3
2764 Male, age 80, right hemisphere 45.1
1938 Female, age 85, left hemisphere 44.8
2613 Female, age 94, left hemisphere 42.6
2686 Male, age 75, right hemisphere 42.4
Hippocampus, CA1
nTPM: 46.1
2749 Male, age 80, left hemisphere 48.4
1873 Female, age 85, both hemispheres 46.9
2527 Male, age 74, both hemispheres 46.1
2045 Male, age 76, both hemispheres 44.8
2082 Female, age 91, right hemisphere 44.1
Hippocampus, CA2
nTPM: 45.8
1892 Male, age 76, both hemispheres 46.4
1963 Male, age 80, left hemisphere 46.4
2249 Male, age 74, both hemispheres 46.1
2437 Female, age 94, left hemisphere 45.5
1940 Female, age 85, left hemisphere 45.4
2113 Female, age 91, right hemisphere 44.8
Hippocampus, CA3
nTPM: 44.5
2137 Male, age 80, left hemisphere 46.2
1867 Male, age 76, both hemispheres 46.0
1891 Female, age 85, both hemispheres 45.9
2436 Male, age 74, both hemispheres 44.8
2620 Female, age 94, left hemisphere 42.7
2861 Female, age 67, both hemispheres 41.6
Parahippocampal cortex
nTPM: 44.9
2532 Female, age 72, left hemisphere 47.1
1850 Male, age 80, both hemispheres 46.0
1990 Female, age 91, right hemisphere 46.0
2250 Female, age 67, right hemisphere 45.8
1933 Female, age 85, both hemispheres 45.1
2018 Male, age 76, both hemispheres 44.9
2245 Female, age 91, both hemispheres 44.6
2693 Female, age 94, both hemispheres 44.3
2692 Male, age 74, both hemispheres 42.4
2622 Female, age 67, right hemisphere 42.3
Perirhinal gyrus
nTPM: 45.9
1794 Male, age 80, right hemisphere 47.6
1841 Female, age 85, right hemisphere 46.4
1847 Female, age 91, left hemisphere 45.9
2848 Male, age 76, right hemisphere 45.0
2521 Female, age 94, right hemisphere 44.5
Subiculum
nTPM: 44.8
1977 Female, age 85, both hemispheres 46.3
2438 Female, age 94, left hemisphere 45.8
2729 Female, age 91, right hemisphere 44.6
1901 Male, age 80, both hemispheres 44.2
2619 Male, age 74, both hemispheres 44.2
2042 Male, age 76, both hemispheres 43.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 80.6
Min nTPM: 22.3
Std nTPM: 9.3
Median nTPM: 37.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 74.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 60.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 58.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 58.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 57.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 56.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 52.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 52.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.8
Sample A Female 3.7
Sample B Female 3.2
Sample C Male 2.8
Sample D Male 3.4
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.5
Sample A Female 2.6
Sample B Female 3.7
Sample C Male 2.8
Sample D Male 2.5
Subiculum
nTPM: 2.9
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.7
Sample A Female 3.1
Sample B Female 2.8
Sample C Male 2.7
Sample D Male 2.8
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.5
Sample A Female 3.1
Sample B Female 3.4
Sample C Male 2.5
Sample D Male 3.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.1
Sample A Male 26.9
Sample B Male 28.7
Sample C Female 30.0
Sample D Female 21.1
Hippocampal formation
nTPM: 37.1
Samples: 4

Max nTPM: 42.4
Min nTPM: 34.2
Sample A Male 34.4
Sample B Male 34.2
Sample C Female 42.4
Sample D Female 37.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75198082 Antisense, RP_060502_01_F08, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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