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NCAM1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:135.6 nTPM
HPA:135.6 nTPM
GTEx:124.7 nTPM
FANTOM5:409.8 Scaled Tags Per Million
Pig:226.3 nTPM
Mouse:91.7 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039835Antibody CAB000142Antibody CAB018071
Glial cells LowMediumLow
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.6
Sample id Sample description nTPM
Hippocampus
nTPM: 101.2
1898 Male, age 80, left hemisphere 120.5
1855 Male, age 76, left hemisphere 114.7
2529 Female, age 94, left hemisphere 103.3
2621 Female, age 67, right hemisphere 101.4
1911 Female, age 85, right hemisphere 93.6
2148 Female, age 91, left hemisphere 73.7
Dentate gyrus
nTPM: 93.2
2246 Female, age 85, both hemispheres 113.0
2010 Male, age 76, both hemispheres 110.6
2530 Female, age 94, left hemisphere 101.5
2528 Male, age 74, both hemispheres 96.1
2531 Female, age 67, both hemispheres 72.2
1927 Female, age 91, both hemispheres 65.8
Entorhinal gyrus
nTPM: 135.6
2764 Male, age 80, right hemisphere 157.0
2117 Female, age 91, right hemisphere 151.4
1938 Female, age 85, left hemisphere 147.4
2613 Female, age 94, left hemisphere 146.9
1787 Male, age 76, left hemisphere 132.2
2686 Male, age 75, right hemisphere 78.9
Hippocampus, CA1
nTPM: 96.6
2527 Male, age 74, both hemispheres 112.3
2045 Male, age 76, both hemispheres 102.6
1873 Female, age 85, both hemispheres 101.8
2749 Male, age 80, left hemisphere 92.9
2082 Female, age 91, right hemisphere 73.4
Hippocampus, CA2
nTPM: 99.2
1892 Male, age 76, both hemispheres 118.3
2249 Male, age 74, both hemispheres 108.6
2437 Female, age 94, left hemisphere 107.9
1940 Female, age 85, left hemisphere 89.6
2113 Female, age 91, right hemisphere 88.5
1963 Male, age 80, left hemisphere 82.5
Hippocampus, CA3
nTPM: 82.7
1891 Female, age 85, both hemispheres 129.6
1867 Male, age 76, both hemispheres 97.5
2620 Female, age 94, left hemisphere 83.3
2137 Male, age 80, left hemisphere 67.3
2436 Male, age 74, both hemispheres 63.3
2861 Female, age 67, both hemispheres 55.4
Parahippocampal cortex
nTPM: 122.2
2532 Female, age 72, left hemisphere 143.0
1933 Female, age 85, both hemispheres 136.7
2692 Male, age 74, both hemispheres 135.3
1850 Male, age 80, both hemispheres 134.0
1990 Female, age 91, right hemisphere 122.8
2250 Female, age 67, right hemisphere 117.2
2245 Female, age 91, both hemispheres 116.8
2018 Male, age 76, both hemispheres 108.2
2693 Female, age 94, both hemispheres 106.9
2622 Female, age 67, right hemisphere 101.7
Perirhinal gyrus
nTPM: 124.4
1847 Female, age 91, left hemisphere 131.0
2848 Male, age 76, right hemisphere 129.8
1794 Male, age 80, right hemisphere 126.7
2521 Female, age 94, right hemisphere 119.8
1841 Female, age 85, right hemisphere 115.1
Subiculum
nTPM: 131.7
1977 Female, age 85, both hemispheres 152.5
2438 Female, age 94, left hemisphere 145.1
2619 Male, age 74, both hemispheres 139.1
1901 Male, age 80, both hemispheres 137.8
2042 Male, age 76, both hemispheres 132.4
2729 Female, age 91, right hemisphere 83.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 124.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 124.7
Samples: 197

Max nTPM: 284.5
Min nTPM: 38.6
Std nTPM: 35.6
Median nTPM: 118.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 284.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 231.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 228.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 227.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 209.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 207.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 206.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 206.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 206.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 198.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 192.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 409.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 409.8
FF:10153-102I9 76 years, female 440.8
FF:10169-103B7 60 years, female 378.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 226.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 200.1
Samples: 4

Max nTPM: 243.8
Min nTPM: 131.3
Sample A Female 224.5
Sample B Female 200.8
Sample C Male 243.8
Sample D Male 131.3
Entorhinal cortex
nTPM: 214.9
Samples: 4

Max nTPM: 228.5
Min nTPM: 184.5
Sample A Female 226.7
Sample B Female 184.5
Sample C Male 228.5
Sample D Male 219.9
Subiculum
nTPM: 226.3
Samples: 4

Max nTPM: 276.0
Min nTPM: 188.3
Sample A Female 276.0
Sample B Female 208.2
Sample C Male 232.6
Sample D Male 188.3
Ventral hippocampus
nTPM: 216.4
Samples: 4

Max nTPM: 291.1
Min nTPM: 166.4
Sample A Female 201.9
Sample B Female 166.4
Sample C Male 291.1
Sample D Male 206.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 104.2
Min nTPM: 74.4
Sample A Male 90.2
Sample B Male 74.4
Sample C Female 85.5
Sample D Female 104.2
Hippocampal formation
nTPM: 91.7
Samples: 4

Max nTPM: 103.8
Min nTPM: 76.5
Sample A Male 76.5
Sample B Male 93.3
Sample C Female 103.8
Sample D Female 93.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
80342134 Antisense, RP_071204_04_E02, Mouse strain C57BL/6J (56 days, male) 1.6

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