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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:95.5 nTPM
HPA:95.5 nTPM
GTEx:411.3 nTPM
FANTOM5:241.1 Scaled Tags Per Million
Pig:113.3 nTPM
Mouse:399.3 nTPM
Allen mouse:22.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076844
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.5
Sample id Sample description nTPM
Hippocampus
nTPM: 87.0
1898 Male, age 80, left hemisphere 99.1
2621 Female, age 67, right hemisphere 89.3
2529 Female, age 94, left hemisphere 88.3
1911 Female, age 85, right hemisphere 83.4
2148 Female, age 91, left hemisphere 81.2
1855 Male, age 76, left hemisphere 80.9
Dentate gyrus
nTPM: 87.5
2530 Female, age 94, left hemisphere 97.5
2010 Male, age 76, both hemispheres 97.1
1927 Female, age 91, both hemispheres 84.7
2246 Female, age 85, both hemispheres 83.6
2528 Male, age 74, both hemispheres 82.2
2531 Female, age 67, both hemispheres 80.1
Entorhinal gyrus
nTPM: 94.8
2764 Male, age 80, right hemisphere 99.6
2117 Female, age 91, right hemisphere 98.2
1938 Female, age 85, left hemisphere 97.7
1787 Male, age 76, left hemisphere 96.7
2686 Male, age 75, right hemisphere 89.6
2613 Female, age 94, left hemisphere 86.8
Hippocampus, CA1
nTPM: 85.3
2749 Male, age 80, left hemisphere 94.4
1873 Female, age 85, both hemispheres 89.2
2045 Male, age 76, both hemispheres 82.7
2527 Male, age 74, both hemispheres 82.6
2082 Female, age 91, right hemisphere 77.6
Hippocampus, CA2
nTPM: 91.6
1963 Male, age 80, left hemisphere 106.8
1892 Male, age 76, both hemispheres 100.2
2437 Female, age 94, left hemisphere 96.6
2249 Male, age 74, both hemispheres 86.0
1940 Female, age 85, left hemisphere 81.8
2113 Female, age 91, right hemisphere 77.9
Hippocampus, CA3
nTPM: 84.8
1867 Male, age 76, both hemispheres 99.0
1891 Female, age 85, both hemispheres 98.5
2137 Male, age 80, left hemisphere 83.9
2620 Female, age 94, left hemisphere 81.7
2861 Female, age 67, both hemispheres 73.3
2436 Male, age 74, both hemispheres 72.4
Parahippocampal cortex
nTPM: 87.1
1850 Male, age 80, both hemispheres 96.6
1990 Female, age 91, right hemisphere 96.0
2018 Male, age 76, both hemispheres 95.2
2532 Female, age 72, left hemisphere 92.1
2692 Male, age 74, both hemispheres 91.2
1933 Female, age 85, both hemispheres 87.7
2245 Female, age 91, both hemispheres 81.8
2693 Female, age 94, both hemispheres 80.1
2250 Female, age 67, right hemisphere 75.1
2622 Female, age 67, right hemisphere 75.1
Perirhinal gyrus
nTPM: 90.4
2848 Male, age 76, right hemisphere 93.9
1794 Male, age 80, right hemisphere 93.2
1841 Female, age 85, right hemisphere 91.8
1847 Female, age 91, left hemisphere 88.4
2521 Female, age 94, right hemisphere 84.9
Subiculum
nTPM: 95.5
1901 Male, age 80, both hemispheres 103.9
2042 Male, age 76, both hemispheres 103.1
2438 Female, age 94, left hemisphere 101.8
1977 Female, age 85, both hemispheres 98.7
2619 Male, age 74, both hemispheres 86.2
2729 Female, age 91, right hemisphere 79.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 411.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 411.3
Samples: 197

Max nTPM: 911.8
Min nTPM: 93.6
Std nTPM: 133.3
Median nTPM: 399.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 911.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 824.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 823.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 785.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 755.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 755.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 741.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 711.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 704.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 691.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 628.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 241.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 241.1
FF:10153-102I9 76 years, female 289.8
FF:10169-103B7 60 years, female 192.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 113.4
Samples: 4

Max nTPM: 161.7
Min nTPM: 67.4
Sample A Female 161.7
Sample B Female 99.9
Sample C Male 124.4
Sample D Male 67.4
Entorhinal cortex
nTPM: 71.6
Samples: 4

Max nTPM: 94.2
Min nTPM: 59.3
Sample A Female 69.9
Sample B Female 94.2
Sample C Male 59.3
Sample D Male 62.9
Subiculum
nTPM: 67.8
Samples: 4

Max nTPM: 82.6
Min nTPM: 57.7
Sample A Female 82.6
Sample B Female 69.2
Sample C Male 61.8
Sample D Male 57.7
Ventral hippocampus
nTPM: 93.2
Samples: 4

Max nTPM: 111.7
Min nTPM: 62.6
Sample A Female 97.5
Sample B Female 62.6
Sample C Male 101.0
Sample D Male 111.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 399.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 346.5
Samples: 4

Max nTPM: 368.9
Min nTPM: 292.2
Sample A Male 367.1
Sample B Male 368.9
Sample C Female 357.7
Sample D Female 292.2
Hippocampal formation
nTPM: 399.3
Samples: 4

Max nTPM: 423.7
Min nTPM: 379.6
Sample A Male 423.7
Sample B Male 379.6
Sample C Female 398.9
Sample D Female 395.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.2
68632051 Antisense, RP_050125_01_F03, Mouse strain C57BL/6J (56 days, male) 22.2

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