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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:119.6 nTPM
HPA:119.6 nTPM
GTEx:95.8 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:13.3 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019467Antibody CAB001447
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 119.6
Sample id Sample description nTPM
Hippocampus
nTPM: 117.8
2529 Female, age 94, left hemisphere 122.6
1855 Male, age 76, left hemisphere 118.2
1898 Male, age 80, left hemisphere 118.1
2621 Female, age 67, right hemisphere 116.8
1911 Female, age 85, right hemisphere 116.3
2148 Female, age 91, left hemisphere 114.9
Dentate gyrus
nTPM: 119.6
2528 Male, age 74, both hemispheres 126.2
2531 Female, age 67, both hemispheres 121.8
2530 Female, age 94, left hemisphere 121.4
2010 Male, age 76, both hemispheres 116.8
2246 Female, age 85, both hemispheres 116.8
1927 Female, age 91, both hemispheres 114.5
Entorhinal gyrus
nTPM: 114.9
2686 Male, age 75, right hemisphere 116.0
2117 Female, age 91, right hemisphere 115.8
1787 Male, age 76, left hemisphere 115.5
2764 Male, age 80, right hemisphere 114.4
1938 Female, age 85, left hemisphere 114.2
2613 Female, age 94, left hemisphere 113.8
Hippocampus, CA1
nTPM: 114.2
2045 Male, age 76, both hemispheres 116.1
2527 Male, age 74, both hemispheres 115.5
1873 Female, age 85, both hemispheres 115.3
2082 Female, age 91, right hemisphere 114.1
2749 Male, age 80, left hemisphere 109.8
Hippocampus, CA2
nTPM: 117.2
1963 Male, age 80, left hemisphere 120.8
2437 Female, age 94, left hemisphere 119.5
1940 Female, age 85, left hemisphere 116.5
2113 Female, age 91, right hemisphere 115.6
1892 Male, age 76, both hemispheres 115.5
2249 Male, age 74, both hemispheres 115.3
Hippocampus, CA3
nTPM: 117.8
2861 Female, age 67, both hemispheres 120.5
2137 Male, age 80, left hemisphere 118.9
1891 Female, age 85, both hemispheres 118.2
2620 Female, age 94, left hemisphere 117.7
1867 Male, age 76, both hemispheres 117.1
2436 Male, age 74, both hemispheres 114.6
Parahippocampal cortex
nTPM: 116.3
1990 Female, age 91, right hemisphere 124.2
2250 Female, age 67, right hemisphere 120.4
2245 Female, age 91, both hemispheres 118.3
2018 Male, age 76, both hemispheres 117.4
2622 Female, age 67, right hemisphere 114.7
2692 Male, age 74, both hemispheres 114.7
1933 Female, age 85, both hemispheres 114.5
2532 Female, age 72, left hemisphere 114.3
2693 Female, age 94, both hemispheres 113.1
1850 Male, age 80, both hemispheres 111.7
Perirhinal gyrus
nTPM: 116.5
2521 Female, age 94, right hemisphere 125.9
1841 Female, age 85, right hemisphere 117.9
1794 Male, age 80, right hemisphere 113.6
2848 Male, age 76, right hemisphere 113.5
1847 Female, age 91, left hemisphere 111.7
Subiculum
nTPM: 116.9
2042 Male, age 76, both hemispheres 118.5
2619 Male, age 74, both hemispheres 118.5
1901 Male, age 80, both hemispheres 116.5
1977 Female, age 85, both hemispheres 116.3
2729 Female, age 91, right hemisphere 115.7
2438 Female, age 94, left hemisphere 115.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.8
Samples: 197

Max nTPM: 967.4
Min nTPM: 20.5
Std nTPM: 92.8
Median nTPM: 69.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 967.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 622.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 347.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 300.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 298.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 291.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 264.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 254.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 227.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 226.1
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 221.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10153-102I9 76 years, female 43.2
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 16.8
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 5.9
Sample C Male 16.8
Sample D Male 6.2
Entorhinal cortex
nTPM: 14.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 2.2
Sample A Female 21.9
Sample B Female 15.8
Sample C Male 19.0
Sample D Male 2.2
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 3.3
Sample A Female 9.9
Sample B Female 3.3
Sample C Male 15.4
Sample D Male 22.1
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 69.2
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 11.0
Sample C Male 69.2
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 16.1
Min nTPM: 9.8
Sample A Male 15.8
Sample B Male 9.8
Sample C Female 16.1
Sample D Female 11.7
Hippocampal formation
nTPM: 10.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.4
Sample A Male 9.3
Sample B Male 10.8
Sample C Female 8.4
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68443116 Antisense, RP_050111_01_D06, Mouse strain C57BL/6J (56 days, male) 3.0

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The Human Protein Atlas

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