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HIRIP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.9 nTPM
HPA:22.9 nTPM
GTEx:19.6 nTPM
FANTOM5:22.4 Scaled Tags Per Million
Pig:3.5 nTPM
Mouse:8.2 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063205
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.9
Sample id Sample description nTPM
Hippocampus
nTPM: 22.3
2529 Female, age 94, left hemisphere 23.2
1898 Male, age 80, left hemisphere 22.9
1911 Female, age 85, right hemisphere 22.3
2621 Female, age 67, right hemisphere 22.3
2148 Female, age 91, left hemisphere 21.7
1855 Male, age 76, left hemisphere 21.2
Dentate gyrus
nTPM: 21.9
2530 Female, age 94, left hemisphere 24.6
2531 Female, age 67, both hemispheres 22.4
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 21.2
2010 Male, age 76, both hemispheres 21.1
1927 Female, age 91, both hemispheres 20.9
Entorhinal gyrus
nTPM: 22.9
2117 Female, age 91, right hemisphere 23.5
2764 Male, age 80, right hemisphere 23.5
2686 Male, age 75, right hemisphere 23.4
1787 Male, age 76, left hemisphere 23.1
1938 Female, age 85, left hemisphere 21.8
2613 Female, age 94, left hemisphere 21.8
Hippocampus, CA1
nTPM: 21.3
2527 Male, age 74, both hemispheres 22.2
2082 Female, age 91, right hemisphere 21.4
1873 Female, age 85, both hemispheres 21.3
2749 Male, age 80, left hemisphere 21.0
2045 Male, age 76, both hemispheres 20.3
Hippocampus, CA2
nTPM: 22.1
2437 Female, age 94, left hemisphere 23.1
1940 Female, age 85, left hemisphere 22.0
1963 Male, age 80, left hemisphere 21.9
2249 Male, age 74, both hemispheres 21.9
2113 Female, age 91, right hemisphere 21.8
1892 Male, age 76, both hemispheres 21.6
Hippocampus, CA3
nTPM: 21.4
1891 Female, age 85, both hemispheres 22.5
2861 Female, age 67, both hemispheres 22.0
1867 Male, age 76, both hemispheres 21.5
2620 Female, age 94, left hemisphere 21.3
2137 Male, age 80, left hemisphere 21.0
2436 Male, age 74, both hemispheres 20.0
Parahippocampal cortex
nTPM: 22.1
2532 Female, age 72, left hemisphere 23.2
1933 Female, age 85, both hemispheres 23.0
2245 Female, age 91, both hemispheres 23.0
2692 Male, age 74, both hemispheres 22.6
1990 Female, age 91, right hemisphere 22.5
1850 Male, age 80, both hemispheres 22.2
2622 Female, age 67, right hemisphere 22.0
2250 Female, age 67, right hemisphere 21.1
2018 Male, age 76, both hemispheres 20.9
2693 Female, age 94, both hemispheres 20.9
Perirhinal gyrus
nTPM: 21.9
2848 Male, age 76, right hemisphere 22.6
1841 Female, age 85, right hemisphere 22.3
1794 Male, age 80, right hemisphere 21.8
1847 Female, age 91, left hemisphere 21.8
2521 Female, age 94, right hemisphere 20.9
Subiculum
nTPM: 22.6
2438 Female, age 94, left hemisphere 24.4
1977 Female, age 85, both hemispheres 22.6
2042 Male, age 76, both hemispheres 22.6
1901 Male, age 80, both hemispheres 22.5
2619 Male, age 74, both hemispheres 22.3
2729 Female, age 91, right hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 42.9
Min nTPM: 9.6
Std nTPM: 5.0
Median nTPM: 19.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 37.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 33.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 30.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 28.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 28.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 28.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.4
FF:10153-102I9 76 years, female 30.2
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.7
Sample A Female 4.3
Sample B Female 3.0
Sample C Male 4.0
Sample D Male 2.7
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 3.5
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 3.1
Sample C Male 3.5
Sample D Male 3.2
Subiculum
nTPM: 3.5
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.6
Sample A Female 4.8
Sample B Female 3.3
Sample C Male 3.4
Sample D Male 2.6
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.1
Sample A Female 3.4
Sample B Female 2.1
Sample C Male 4.4
Sample D Male 3.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.9
Sample A Male 7.7
Sample B Male 6.9
Sample C Female 7.5
Sample D Female 10.7
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.9
Sample A Male 9.4
Sample B Male 7.4
Sample C Female 6.9
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69837911 Antisense, RP_050222_02_F08, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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