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GPM6A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:469.8 nTPM
HPA:469.8 nTPM
GTEx:356.9 nTPM
FANTOM5:858.7 Scaled Tags Per Million
Pig:453.1 nTPM
Mouse:1231.3 nTPM
Allen mouse:25.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017338
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 469.8
Sample id Sample description nTPM
Hippocampus
nTPM: 351.1
1898 Male, age 80, left hemisphere 392.0
1911 Female, age 85, right hemisphere 365.4
2148 Female, age 91, left hemisphere 360.8
2529 Female, age 94, left hemisphere 337.3
1855 Male, age 76, left hemisphere 331.9
2621 Female, age 67, right hemisphere 319.0
Dentate gyrus
nTPM: 342.3
1927 Female, age 91, both hemispheres 435.1
2246 Female, age 85, both hemispheres 365.3
2528 Male, age 74, both hemispheres 352.8
2010 Male, age 76, both hemispheres 347.4
2531 Female, age 67, both hemispheres 288.1
2530 Female, age 94, left hemisphere 265.0
Entorhinal gyrus
nTPM: 377.1
1938 Female, age 85, left hemisphere 462.8
2764 Male, age 80, right hemisphere 393.9
1787 Male, age 76, left hemisphere 391.3
2117 Female, age 91, right hemisphere 363.1
2613 Female, age 94, left hemisphere 346.5
2686 Male, age 75, right hemisphere 304.9
Hippocampus, CA1
nTPM: 404.6
2749 Male, age 80, left hemisphere 467.3
2527 Male, age 74, both hemispheres 432.0
2045 Male, age 76, both hemispheres 384.6
1873 Female, age 85, both hemispheres 381.5
2082 Female, age 91, right hemisphere 357.3
Hippocampus, CA2
nTPM: 352.7
2249 Male, age 74, both hemispheres 400.9
1892 Male, age 76, both hemispheres 371.8
2113 Female, age 91, right hemisphere 366.3
1963 Male, age 80, left hemisphere 343.9
1940 Female, age 85, left hemisphere 342.9
2437 Female, age 94, left hemisphere 290.1
Hippocampus, CA3
nTPM: 361.8
2137 Male, age 80, left hemisphere 449.3
2436 Male, age 74, both hemispheres 392.7
1867 Male, age 76, both hemispheres 359.7
1891 Female, age 85, both hemispheres 349.3
2620 Female, age 94, left hemisphere 323.3
2861 Female, age 67, both hemispheres 296.6
Parahippocampal cortex
nTPM: 409.4
2250 Female, age 67, right hemisphere 474.2
1850 Male, age 80, both hemispheres 468.8
1933 Female, age 85, both hemispheres 453.2
2693 Female, age 94, both hemispheres 426.7
1990 Female, age 91, right hemisphere 406.8
2692 Male, age 74, both hemispheres 395.3
2622 Female, age 67, right hemisphere 390.2
2245 Female, age 91, both hemispheres 381.8
2018 Male, age 76, both hemispheres 361.9
2532 Female, age 72, left hemisphere 335.1
Perirhinal gyrus
nTPM: 469.8
1847 Female, age 91, left hemisphere 518.6
1794 Male, age 80, right hemisphere 505.7
1841 Female, age 85, right hemisphere 500.5
2848 Male, age 76, right hemisphere 412.3
2521 Female, age 94, right hemisphere 411.9
Subiculum
nTPM: 348.7
1977 Female, age 85, both hemispheres 405.5
2619 Male, age 74, both hemispheres 393.3
2729 Female, age 91, right hemisphere 383.4
1901 Male, age 80, both hemispheres 335.3
2438 Female, age 94, left hemisphere 292.6
2042 Male, age 76, both hemispheres 282.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 356.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 356.9
Samples: 197

Max nTPM: 1061.7
Min nTPM: 62.1
Std nTPM: 156.1
Median nTPM: 360.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1061.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 936.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 844.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 698.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 648.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 633.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 618.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 610.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 600.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 599.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 592.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 858.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 858.7
FF:10153-102I9 76 years, female 908.7
FF:10169-103B7 60 years, female 808.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 453.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 401.9
Samples: 4

Max nTPM: 469.3
Min nTPM: 339.6
Sample A Female 469.3
Sample B Female 422.3
Sample C Male 339.6
Sample D Male 376.3
Entorhinal cortex
nTPM: 453.1
Samples: 4

Max nTPM: 530.1
Min nTPM: 363.2
Sample A Female 435.5
Sample B Female 530.1
Sample C Male 483.7
Sample D Male 363.2
Subiculum
nTPM: 452.2
Samples: 4

Max nTPM: 574.3
Min nTPM: 369.2
Sample A Female 574.3
Sample B Female 460.5
Sample C Male 369.2
Sample D Male 404.8
Ventral hippocampus
nTPM: 377.2
Samples: 4

Max nTPM: 406.0
Min nTPM: 356.4
Sample A Female 406.0
Sample B Female 370.1
Sample C Male 376.4
Sample D Male 356.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1231.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1231.4
Samples: 4

Max nTPM: 1356.5
Min nTPM: 1150.9
Sample A Male 1150.9
Sample B Male 1215.5
Sample C Female 1202.5
Sample D Female 1356.5
Hippocampal formation
nTPM: 1163.3
Samples: 4

Max nTPM: 1276.1
Min nTPM: 1064.4
Sample A Male 1276.1
Sample B Male 1165.7
Sample C Female 1146.8
Sample D Female 1064.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.8
68080704 Antisense, RP_040929_01_G03, Mouse strain C57BL/6J (56 days, male) 25.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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