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CACNA1C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		138.248
RNA expressioni
Consensus:2.0 nTPM
HPA:2.0 nTPM
GTEx:2.9 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:10.6 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039796
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079031
Hippocampal formation mean intensity 138.248
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 83.534
Molecular layer of the dentate gyrus 81.409
Granular dentate gyrus 56.892
CA1 - oriens layer 84.521
CA1 - pyramidal layer 71.840
CA1 - radiatum layer 84.463
CA2 - oriens layer 104.710
CA2 - pyramidal layer 94.923
CA2 - radiatum layer 98.255
CA3 - oriens layer 113.314
CA3 - pyramidal layer 87.307
CA3 - radiatum layer 104.401
Stratum lucidum 94.807
Lacunosum moleculare 74.321
Subiculum 71.179

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2.0
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
2148 Female, age 91, left hemisphere 0.4
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 1.1
2531 Female, age 67, both hemispheres 6.3
2246 Female, age 85, both hemispheres 0.7
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 0.4
2686 Male, age 75, right hemisphere 2.1
2613 Female, age 94, left hemisphere 0.3
2764 Male, age 80, right hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
2045 Male, age 76, both hemispheres 0.3
1873 Female, age 85, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 2.0
2620 Female, age 94, left hemisphere 7.6
2861 Female, age 67, both hemispheres 4.4
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.5
2622 Female, age 67, right hemisphere 2.9
2693 Female, age 94, both hemispheres 2.1
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.9
2521 Female, age 94, right hemisphere 3.1
2848 Male, age 76, right hemisphere 0.8
1841 Female, age 85, right hemisphere 0.3
1794 Male, age 80, right hemisphere 0.2
1847 Female, age 91, left hemisphere 0.0
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.9
Samples: 197

Max nTPM: 7.8
Min nTPM: 0.5
Std nTPM: 1.5
Median nTPM: 2.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 7.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 7.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 6.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 6.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 6.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 6.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 6.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 6.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 6.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 6.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.5
FF:10153-102I9 76 years, female 36.5
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 8.3
Min nTPM: 2.6
Sample A Female 4.7
Sample B Female 7.1
Sample C Male 2.6
Sample D Male 8.3
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.9
Sample A Female 8.0
Sample B Female 7.1
Sample C Male 6.9
Sample D Male 8.8
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.1
Sample A Female 5.9
Sample B Female 5.1
Sample C Male 5.5
Sample D Male 5.2
Ventral hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.7
Sample A Female 5.8
Sample B Female 6.7
Sample C Male 7.9
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.3
Sample A Male 8.7
Sample B Male 8.3
Sample C Female 8.6
Sample D Female 12.7
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 13.9
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 13.5
Sample C Female 13.9
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
69236891 Antisense, RP_050331_01_D08, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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