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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.1 nTPM
HPA:37.1 nTPM
GTEx:20.1 nTPM
FANTOM5:12.4 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:15.7 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.4
1855 Male, age 76, left hemisphere 40.7
2148 Female, age 91, left hemisphere 34.4
2621 Female, age 67, right hemisphere 28.0
1898 Male, age 80, left hemisphere 27.9
1911 Female, age 85, right hemisphere 22.9
2529 Female, age 94, left hemisphere 22.4
Dentate gyrus
nTPM: 29.9
2010 Male, age 76, both hemispheres 40.3
2531 Female, age 67, both hemispheres 31.5
1927 Female, age 91, both hemispheres 30.1
2246 Female, age 85, both hemispheres 26.6
2530 Female, age 94, left hemisphere 26.0
2528 Male, age 74, both hemispheres 24.6
Entorhinal gyrus
nTPM: 25.5
2764 Male, age 80, right hemisphere 31.0
2686 Male, age 75, right hemisphere 28.5
1787 Male, age 76, left hemisphere 26.7
1938 Female, age 85, left hemisphere 25.0
2613 Female, age 94, left hemisphere 21.0
2117 Female, age 91, right hemisphere 20.9
Hippocampus, CA1
nTPM: 35.2
2045 Male, age 76, both hemispheres 78.2
2082 Female, age 91, right hemisphere 26.2
1873 Female, age 85, both hemispheres 25.4
2749 Male, age 80, left hemisphere 24.3
2527 Male, age 74, both hemispheres 21.9
Hippocampus, CA2
nTPM: 29.1
1940 Female, age 85, left hemisphere 43.9
1892 Male, age 76, both hemispheres 30.7
2113 Female, age 91, right hemisphere 27.6
1963 Male, age 80, left hemisphere 27.3
2437 Female, age 94, left hemisphere 24.1
2249 Male, age 74, both hemispheres 20.8
Hippocampus, CA3
nTPM: 30.4
2620 Female, age 94, left hemisphere 49.1
2861 Female, age 67, both hemispheres 33.8
1867 Male, age 76, both hemispheres 30.2
2137 Male, age 80, left hemisphere 26.8
1891 Female, age 85, both hemispheres 21.9
2436 Male, age 74, both hemispheres 20.4
Parahippocampal cortex
nTPM: 28.7
1850 Male, age 80, both hemispheres 35.4
2622 Female, age 67, right hemisphere 33.0
2532 Female, age 72, left hemisphere 31.9
1933 Female, age 85, both hemispheres 30.2
2018 Male, age 76, both hemispheres 29.5
2693 Female, age 94, both hemispheres 29.4
2245 Female, age 91, both hemispheres 28.6
2250 Female, age 67, right hemisphere 26.1
1990 Female, age 91, right hemisphere 22.4
2692 Male, age 74, both hemispheres 21.0
Perirhinal gyrus
nTPM: 37.1
1794 Male, age 80, right hemisphere 42.6
2521 Female, age 94, right hemisphere 41.3
1841 Female, age 85, right hemisphere 37.6
2848 Male, age 76, right hemisphere 34.8
1847 Female, age 91, left hemisphere 28.9
Subiculum
nTPM: 22.9
1977 Female, age 85, both hemispheres 27.9
2729 Female, age 91, right hemisphere 24.1
2619 Male, age 74, both hemispheres 23.2
2042 Male, age 76, both hemispheres 22.2
1901 Male, age 80, both hemispheres 21.4
2438 Female, age 94, left hemisphere 18.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 79.3
Min nTPM: 4.6
Std nTPM: 11.1
Median nTPM: 17.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 79.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 60.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 59.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 46.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 44.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 44.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 43.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 41.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 40.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.4
FF:10153-102I9 76 years, female 13.3
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 4.3
Sample C Male 2.9
Sample D Male 4.0
Entorhinal cortex
nTPM: 5.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 3.6
Sample A Female 7.2
Sample B Female 3.8
Sample C Male 6.6
Sample D Male 3.6
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 3.2
Sample A Female 8.8
Sample B Female 3.2
Sample C Male 5.1
Sample D Male 5.7
Ventral hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 5.4
Min nTPM: 1.8
Sample A Female 3.9
Sample B Female 2.9
Sample C Male 5.4
Sample D Male 1.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 17.9
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 9.4
Sample C Female 9.4
Sample D Female 17.9
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 24.2
Min nTPM: 11.0
Sample A Male 12.2
Sample B Male 15.6
Sample C Female 24.2
Sample D Female 11.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75651160 Antisense, RP_060518_01_A05, Mouse strain C57BL/6J (56 days, male) 0.9
68844056 Antisense, RP_050217_02_G10, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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