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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:40.6 nTPM
FANTOM5:56.0 Scaled Tags Per Million
Pig:25.8 nTPM
Mouse:30.6 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011316Antibody HPA011964
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
1855 Male, age 76, left hemisphere 39.3
1898 Male, age 80, left hemisphere 33.8
1911 Female, age 85, right hemisphere 32.5
2621 Female, age 67, right hemisphere 32.2
2148 Female, age 91, left hemisphere 30.2
2529 Female, age 94, left hemisphere 29.5
Dentate gyrus
nTPM: 33.1
2010 Male, age 76, both hemispheres 43.6
2530 Female, age 94, left hemisphere 34.7
2528 Male, age 74, both hemispheres 31.5
1927 Female, age 91, both hemispheres 31.1
2246 Female, age 85, both hemispheres 29.9
2531 Female, age 67, both hemispheres 27.6
Entorhinal gyrus
nTPM: 31.7
1787 Male, age 76, left hemisphere 37.8
2117 Female, age 91, right hemisphere 36.8
2764 Male, age 80, right hemisphere 30.0
1938 Female, age 85, left hemisphere 29.8
2613 Female, age 94, left hemisphere 29.0
2686 Male, age 75, right hemisphere 26.8
Hippocampus, CA1
nTPM: 32.3
2045 Male, age 76, both hemispheres 36.4
2749 Male, age 80, left hemisphere 35.1
1873 Female, age 85, both hemispheres 31.6
2082 Female, age 91, right hemisphere 29.7
2527 Male, age 74, both hemispheres 28.5
Hippocampus, CA2
nTPM: 33.2
1963 Male, age 80, left hemisphere 36.3
1892 Male, age 76, both hemispheres 35.4
2249 Male, age 74, both hemispheres 33.0
1940 Female, age 85, left hemisphere 32.5
2437 Female, age 94, left hemisphere 32.5
2113 Female, age 91, right hemisphere 29.6
Hippocampus, CA3
nTPM: 31.5
1867 Male, age 76, both hemispheres 38.4
1891 Female, age 85, both hemispheres 35.6
2436 Male, age 74, both hemispheres 33.9
2137 Male, age 80, left hemisphere 30.9
2861 Female, age 67, both hemispheres 25.4
2620 Female, age 94, left hemisphere 24.9
Parahippocampal cortex
nTPM: 28.8
2018 Male, age 76, both hemispheres 40.0
1990 Female, age 91, right hemisphere 31.2
2532 Female, age 72, left hemisphere 29.3
2692 Male, age 74, both hemispheres 28.0
1933 Female, age 85, both hemispheres 27.9
2245 Female, age 91, both hemispheres 27.4
2693 Female, age 94, both hemispheres 27.4
1850 Male, age 80, both hemispheres 27.3
2250 Female, age 67, right hemisphere 26.2
2622 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 27.8
2521 Female, age 94, right hemisphere 31.7
2848 Male, age 76, right hemisphere 29.3
1847 Female, age 91, left hemisphere 26.8
1794 Male, age 80, right hemisphere 25.9
1841 Female, age 85, right hemisphere 25.3
Subiculum
nTPM: 34.4
2042 Male, age 76, both hemispheres 46.2
1901 Male, age 80, both hemispheres 37.1
1977 Female, age 85, both hemispheres 33.7
2729 Female, age 91, right hemisphere 32.9
2619 Male, age 74, both hemispheres 28.9
2438 Female, age 94, left hemisphere 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.6
Samples: 197

Max nTPM: 116.4
Min nTPM: 10.2
Std nTPM: 19.6
Median nTPM: 34.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 116.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 103.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 100.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 93.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 91.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 90.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 84.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 83.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 81.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 79.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.0
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 34.2
Min nTPM: 16.0
Sample A Female 34.2
Sample B Female 23.9
Sample C Male 29.1
Sample D Male 16.0
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.9
Sample A Female 15.7
Sample B Female 17.0
Sample C Male 14.5
Sample D Male 12.9
Subiculum
nTPM: 14.0
Samples: 4

Max nTPM: 14.7
Min nTPM: 12.6
Sample A Female 14.6
Sample B Female 14.2
Sample C Male 12.6
Sample D Male 14.7
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 25.2
Min nTPM: 12.3
Sample A Female 21.5
Sample B Female 12.3
Sample C Male 19.0
Sample D Male 25.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 27.6
Min nTPM: 24.4
Sample A Male 27.5
Sample B Male 27.6
Sample C Female 24.4
Sample D Female 25.7
Hippocampal formation
nTPM: 30.7
Samples: 4

Max nTPM: 36.0
Min nTPM: 26.8
Sample A Male 26.8
Sample B Male 31.1
Sample C Female 36.0
Sample D Female 28.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
100144473 Antisense, RP_110421_03_G05, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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