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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:30.5 nTPM
HPA:30.5 nTPM
GTEx:29.9 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:26.6 nTPM
Mouse:16.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046157
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
1898 Male, age 80, left hemisphere 27.3
1911 Female, age 85, right hemisphere 24.3
2529 Female, age 94, left hemisphere 23.8
2621 Female, age 67, right hemisphere 23.8
1855 Male, age 76, left hemisphere 23.6
2148 Female, age 91, left hemisphere 22.7
Dentate gyrus
nTPM: 24.8
1927 Female, age 91, both hemispheres 26.9
2246 Female, age 85, both hemispheres 26.6
2530 Female, age 94, left hemisphere 25.2
2010 Male, age 76, both hemispheres 24.9
2528 Male, age 74, both hemispheres 22.9
2531 Female, age 67, both hemispheres 22.5
Entorhinal gyrus
nTPM: 27.1
1938 Female, age 85, left hemisphere 30.4
2613 Female, age 94, left hemisphere 28.7
2764 Male, age 80, right hemisphere 27.3
1787 Male, age 76, left hemisphere 27.2
2686 Male, age 75, right hemisphere 27.2
2117 Female, age 91, right hemisphere 21.6
Hippocampus, CA1
nTPM: 26.1
2749 Male, age 80, left hemisphere 30.6
1873 Female, age 85, both hemispheres 26.6
2527 Male, age 74, both hemispheres 24.7
2045 Male, age 76, both hemispheres 24.3
2082 Female, age 91, right hemisphere 24.1
Hippocampus, CA2
nTPM: 25.3
1892 Male, age 76, both hemispheres 30.9
1940 Female, age 85, left hemisphere 25.6
1963 Male, age 80, left hemisphere 24.7
2249 Male, age 74, both hemispheres 23.6
2437 Female, age 94, left hemisphere 23.6
2113 Female, age 91, right hemisphere 23.5
Hippocampus, CA3
nTPM: 25.1
2137 Male, age 80, left hemisphere 29.1
1867 Male, age 76, both hemispheres 27.1
1891 Female, age 85, both hemispheres 26.5
2620 Female, age 94, left hemisphere 25.0
2436 Male, age 74, both hemispheres 21.8
2861 Female, age 67, both hemispheres 21.3
Parahippocampal cortex
nTPM: 27.0
1850 Male, age 80, both hemispheres 31.9
2693 Female, age 94, both hemispheres 30.9
1933 Female, age 85, both hemispheres 28.9
1990 Female, age 91, right hemisphere 27.3
2018 Male, age 76, both hemispheres 26.6
2245 Female, age 91, both hemispheres 25.4
2532 Female, age 72, left hemisphere 25.4
2692 Male, age 74, both hemispheres 25.4
2250 Female, age 67, right hemisphere 25.0
2622 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 30.5
1841 Female, age 85, right hemisphere 32.3
1847 Female, age 91, left hemisphere 31.6
2848 Male, age 76, right hemisphere 30.8
1794 Male, age 80, right hemisphere 30.6
2521 Female, age 94, right hemisphere 27.4
Subiculum
nTPM: 25.5
1977 Female, age 85, both hemispheres 28.0
2438 Female, age 94, left hemisphere 27.1
1901 Male, age 80, both hemispheres 26.0
2042 Male, age 76, both hemispheres 25.0
2619 Male, age 74, both hemispheres 23.6
2729 Female, age 91, right hemisphere 23.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.9
Samples: 197

Max nTPM: 62.5
Min nTPM: 5.6
Std nTPM: 9.6
Median nTPM: 27.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 55.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 54.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 54.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 53.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 52.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 52.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 49.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 49.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 31.4
Min nTPM: 23.5
Sample A Female 31.4
Sample B Female 26.5
Sample C Male 25.0
Sample D Male 23.5
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.8
Min nTPM: 22.0
Sample A Female 25.8
Sample B Female 27.8
Sample C Male 23.4
Sample D Male 22.0
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 27.3
Min nTPM: 22.7
Sample A Female 27.3
Sample B Female 23.7
Sample C Male 22.8
Sample D Male 22.7
Ventral hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.1
Sample A Female 27.5
Sample B Female 22.3
Sample C Male 22.1
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.3
Sample A Male 13.3
Sample B Male 16.9
Sample C Female 18.3
Sample D Female 16.3
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.8
Sample A Male 16.8
Sample B Male 12.8
Sample C Female 15.8
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
71789927 Antisense, RP_050926_02_C11, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

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