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ATP5F1A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:207.7 nTPM
HPA:207.7 nTPM
GTEx:230.8 nTPM
FANTOM5:179.4 Scaled Tags Per Million
Pig:115.2 nTPM
Mouse:782.4 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040622Antibody HPA044202Antibody CAB013067
Glial cells LowMediumHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 207.7
Sample id Sample description nTPM
Hippocampus
nTPM: 191.7
1898 Male, age 80, left hemisphere 223.3
2621 Female, age 67, right hemisphere 196.2
2529 Female, age 94, left hemisphere 190.6
2148 Female, age 91, left hemisphere 188.1
1855 Male, age 76, left hemisphere 177.0
1911 Female, age 85, right hemisphere 174.8
Dentate gyrus
nTPM: 189.9
1927 Female, age 91, both hemispheres 216.0
2528 Male, age 74, both hemispheres 198.0
2010 Male, age 76, both hemispheres 193.3
2246 Female, age 85, both hemispheres 181.9
2530 Female, age 94, left hemisphere 180.2
2531 Female, age 67, both hemispheres 169.9
Entorhinal gyrus
nTPM: 188.2
2764 Male, age 80, right hemisphere 207.6
1938 Female, age 85, left hemisphere 195.4
1787 Male, age 76, left hemisphere 187.6
2117 Female, age 91, right hemisphere 183.9
2613 Female, age 94, left hemisphere 178.6
2686 Male, age 75, right hemisphere 176.0
Hippocampus, CA1
nTPM: 201.0
2749 Male, age 80, left hemisphere 244.3
2527 Male, age 74, both hemispheres 200.2
1873 Female, age 85, both hemispheres 196.8
2045 Male, age 76, both hemispheres 182.6
2082 Female, age 91, right hemisphere 181.1
Hippocampus, CA2
nTPM: 202.7
1892 Male, age 76, both hemispheres 230.6
2249 Male, age 74, both hemispheres 230.0
1963 Male, age 80, left hemisphere 220.4
2437 Female, age 94, left hemisphere 183.1
2113 Female, age 91, right hemisphere 179.7
1940 Female, age 85, left hemisphere 172.2
Hippocampus, CA3
nTPM: 204.8
2436 Male, age 74, both hemispheres 288.7
2137 Male, age 80, left hemisphere 207.5
1867 Male, age 76, both hemispheres 205.4
1891 Female, age 85, both hemispheres 184.0
2861 Female, age 67, both hemispheres 175.8
2620 Female, age 94, left hemisphere 167.1
Parahippocampal cortex
nTPM: 192.5
1850 Male, age 80, both hemispheres 211.4
1990 Female, age 91, right hemisphere 204.2
2250 Female, age 67, right hemisphere 199.9
2622 Female, age 67, right hemisphere 196.1
2532 Female, age 72, left hemisphere 190.7
1933 Female, age 85, both hemispheres 190.2
2245 Female, age 91, both hemispheres 189.6
2693 Female, age 94, both hemispheres 186.2
2692 Male, age 74, both hemispheres 181.1
2018 Male, age 76, both hemispheres 175.3
Perirhinal gyrus
nTPM: 207.7
1847 Female, age 91, left hemisphere 235.0
1794 Male, age 80, right hemisphere 216.4
1841 Female, age 85, right hemisphere 204.7
2521 Female, age 94, right hemisphere 196.9
2848 Male, age 76, right hemisphere 185.5
Subiculum
nTPM: 185.5
1901 Male, age 80, both hemispheres 194.5
1977 Female, age 85, both hemispheres 194.2
2619 Male, age 74, both hemispheres 193.8
2729 Female, age 91, right hemisphere 183.9
2438 Female, age 94, left hemisphere 180.3
2042 Male, age 76, both hemispheres 166.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 230.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 230.8
Samples: 197

Max nTPM: 506.0
Min nTPM: 92.6
Std nTPM: 67.2
Median nTPM: 221.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 506.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 419.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 387.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 381.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 380.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 375.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 369.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 361.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 357.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 352.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 351.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 179.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 179.4
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 161.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.2
Samples: 4

Max nTPM: 145.5
Min nTPM: 88.7
Sample A Female 145.5
Sample B Female 114.5
Sample C Male 111.9
Sample D Male 88.7
Entorhinal cortex
nTPM: 103.5
Samples: 4

Max nTPM: 129.0
Min nTPM: 82.2
Sample A Female 101.8
Sample B Female 129.0
Sample C Male 101.1
Sample D Male 82.2
Subiculum
nTPM: 102.6
Samples: 4

Max nTPM: 130.0
Min nTPM: 90.1
Sample A Female 130.0
Sample B Female 98.0
Sample C Male 92.4
Sample D Male 90.1
Ventral hippocampus
nTPM: 109.4
Samples: 4

Max nTPM: 126.5
Min nTPM: 80.8
Sample A Female 126.5
Sample B Female 80.8
Sample C Male 124.1
Sample D Male 106.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 782.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 750.7
Samples: 4

Max nTPM: 798.9
Min nTPM: 713.8
Sample A Male 713.8
Sample B Male 736.2
Sample C Female 753.8
Sample D Female 798.9
Hippocampal formation
nTPM: 782.4
Samples: 4

Max nTPM: 809.9
Min nTPM: 736.0
Sample A Male 803.7
Sample B Male 736.0
Sample C Female 809.9
Sample D Female 780.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
1579 Antisense, RP_040526_01_D04, Mouse strain C57BL/6J (56 days, male) 13.7
1580 Antisense, RP_040526_01_D04, Mouse strain C57BL/6J (56 days, male) 11.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.