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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:11.2 nTPM
FANTOM5:38.2 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:2.2 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Amygdala
nTPM: 5.8
1987 Female, age 91, left hemisphere 9.3
2517 Female, age 94, left hemisphere 7.2
2814 Male, age 76, right hemisphere 7.0
2514 Male, age 75, right hemisphere 4.0
2695 Female, age 67, right hemisphere 1.7
Basal amygdala
nTPM: 7.1
2243 Female, age 91, right hemisphere 11.1
2110 Male, age 80, left hemisphere 9.9
1955 Male, age 76, both hemispheres 8.7
2685 Female, age 94, left hemisphere 7.9
2827 Female, age 67, right hemisphere 3.2
2609 Male, age 75, right hemisphere 1.6
Central amygdala
nTPM: 5.4
2239 Male, age 80, left hemisphere 10.1
1905 Male, age 76, both hemispheres 6.6
2701 Female, age 91, right hemisphere 5.5
2826 Female, age 94, left hemisphere 4.4
2515 Male, age 75, right hemisphere 0.3
Corticomedial amygdala
nTPM: 5.6
2240 Male, age 76, both hemispheres 8.7
2429 Female, age 94, left hemisphere 7.6
2829 Male, age 80, left hemisphere 6.7
2535 Female, age 67, right hemisphere 6.2
2242 Female, age 91, right hemisphere 3.5
2428 Male, age 75, right hemisphere 1.1
Lateral amygdala
nTPM: 5.2
2534 Female, age 94, left hemisphere 7.9
1883 Male, age 76, both hemispheres 7.0
2256 Male, age 80, left hemisphere 6.8
2255 Female, age 91, right hemisphere 6.5
2516 Male, age 75, right hemisphere 1.8
2830 Female, age 67, right hemisphere 1.0
Stria terminalis, bed nucleus
nTPM: 13.2
2486 Female, age 94, both hemispheres 16.2
1974 Female, age 91, both hemispheres 15.5
2201 Male, age 74, unknown 7.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 11.2
Samples: 152

Max nTPM: 32.7
Min nTPM: 1.6
Std nTPM: 5.4
Median nTPM: 10.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 32.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 27.5
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 25.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 24.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 22.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 22.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 22.3
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 21.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 20.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 20.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 19.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 38.2
FF:10151-102I7 76 years, female 38.2

AMYGDALA - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Amygdala
nTPM: 10.4
Samples: 4

Max nTPM: 13.7
Min nTPM: 7.3
Sample A Female 13.7
Sample B Female 7.3
Sample C Male 12.8
Sample D Male 7.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 2.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 2.2
Samples: 4

Max nTPM: 2.5
Min nTPM: 2.0
Sample A Male 2.5
Sample B Male 2.3
Sample C Female 2.0
Sample D Female 2.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
74657930 Antisense, RP_060220_02_F09, Mouse strain C57BL/6J (56 days, male) 0.3
68918994 Antisense, RP_050301_02_C12, Mouse strain C57BL/6J (56 days, male) 0.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.