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HNRNPDL
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:137.8 nTPM
HPA:137.8 nTPM
GTEx:215.0 nTPM
FANTOM5:375.8 Scaled Tags Per Million
Pig:91.5 nTPM
Mouse:105.8 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056820Antibody HPA063147
Glial cells HighMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 137.8
Sample id Sample description nTPM
Hippocampus
nTPM: 133.4
1911 Female, age 85, right hemisphere 146.3
1855 Male, age 76, left hemisphere 136.1
2621 Female, age 67, right hemisphere 134.1
2148 Female, age 91, left hemisphere 128.6
2529 Female, age 94, left hemisphere 128.5
1898 Male, age 80, left hemisphere 126.6
Dentate gyrus
nTPM: 129.4
2246 Female, age 85, both hemispheres 134.3
2531 Female, age 67, both hemispheres 132.4
2010 Male, age 76, both hemispheres 131.5
2530 Female, age 94, left hemisphere 129.4
1927 Female, age 91, both hemispheres 125.9
2528 Male, age 74, both hemispheres 122.8
Entorhinal gyrus
nTPM: 133.6
2686 Male, age 75, right hemisphere 144.7
2117 Female, age 91, right hemisphere 134.0
1938 Female, age 85, left hemisphere 133.3
1787 Male, age 76, left hemisphere 133.1
2613 Female, age 94, left hemisphere 132.8
2764 Male, age 80, right hemisphere 123.7
Hippocampus, CA1
nTPM: 129.4
1873 Female, age 85, both hemispheres 133.5
2082 Female, age 91, right hemisphere 130.6
2527 Male, age 74, both hemispheres 130.0
2749 Male, age 80, left hemisphere 127.3
2045 Male, age 76, both hemispheres 125.8
Hippocampus, CA2
nTPM: 128.8
1940 Female, age 85, left hemisphere 137.5
1892 Male, age 76, both hemispheres 136.4
2113 Female, age 91, right hemisphere 133.6
2249 Male, age 74, both hemispheres 128.2
1963 Male, age 80, left hemisphere 119.5
2437 Female, age 94, left hemisphere 117.7
Hippocampus, CA3
nTPM: 129.7
1891 Female, age 85, both hemispheres 150.0
1867 Male, age 76, both hemispheres 139.3
2137 Male, age 80, left hemisphere 136.1
2436 Male, age 74, both hemispheres 126.2
2861 Female, age 67, both hemispheres 120.6
2620 Female, age 94, left hemisphere 106.2
Parahippocampal cortex
nTPM: 137.8
1850 Male, age 80, both hemispheres 146.8
2693 Female, age 94, both hemispheres 140.9
2532 Female, age 72, left hemisphere 138.7
2245 Female, age 91, both hemispheres 138.5
1933 Female, age 85, both hemispheres 137.0
2018 Male, age 76, both hemispheres 136.3
2692 Male, age 74, both hemispheres 136.3
2622 Female, age 67, right hemisphere 136.1
1990 Female, age 91, right hemisphere 134.7
2250 Female, age 67, right hemisphere 132.4
Perirhinal gyrus
nTPM: 136.7
1841 Female, age 85, right hemisphere 149.0
2848 Male, age 76, right hemisphere 140.0
1794 Male, age 80, right hemisphere 134.4
1847 Female, age 91, left hemisphere 130.3
2521 Female, age 94, right hemisphere 129.7
Subiculum
nTPM: 136.7
1901 Male, age 80, both hemispheres 145.8
2042 Male, age 76, both hemispheres 145.7
1977 Female, age 85, both hemispheres 138.8
2438 Female, age 94, left hemisphere 136.7
2619 Male, age 74, both hemispheres 127.6
2729 Female, age 91, right hemisphere 125.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 215.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 215.0
Samples: 197

Max nTPM: 420.4
Min nTPM: 87.4
Std nTPM: 53.5
Median nTPM: 204.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 420.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 398.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 385.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 343.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 342.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 335.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 334.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 324.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 318.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 317.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 313.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 375.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 375.8
FF:10169-103B7 60 years, female 422.7
FF:10153-102I9 76 years, female 329.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.5
Samples: 4

Max nTPM: 103.7
Min nTPM: 81.0
Sample A Female 99.6
Sample B Female 81.0
Sample C Male 103.7
Sample D Male 81.5
Entorhinal cortex
nTPM: 77.8
Samples: 4

Max nTPM: 81.6
Min nTPM: 75.6
Sample A Female 75.6
Sample B Female 81.6
Sample C Male 76.3
Sample D Male 77.8
Subiculum
nTPM: 82.4
Samples: 4

Max nTPM: 96.1
Min nTPM: 76.1
Sample A Female 96.1
Sample B Female 76.6
Sample C Male 80.6
Sample D Male 76.1
Ventral hippocampus
nTPM: 79.1
Samples: 4

Max nTPM: 88.4
Min nTPM: 72.2
Sample A Female 79.9
Sample B Female 72.2
Sample C Male 76.0
Sample D Male 88.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.0
Samples: 4

Max nTPM: 110.9
Min nTPM: 74.5
Sample A Male 105.5
Sample B Male 110.9
Sample C Female 97.1
Sample D Female 74.5
Hippocampal formation
nTPM: 105.8
Samples: 4

Max nTPM: 123.4
Min nTPM: 87.0
Sample A Male 123.4
Sample B Male 114.4
Sample C Female 87.0
Sample D Female 98.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
68445161 Antisense, RP_050111_02_H06, Mouse strain C57BL/6J (56 days, male) 13.0
572 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 1.9
571 Antisense, RP_Baylor_103185, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.