ABOUTMENU
HELP
NEWS
PTPRK
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.9 nTPM
HPA:15.9 nTPM
GTEx:13.9 nTPM
FANTOM5:97.2 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:32.6 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054822
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1855 Male, age 76, left hemisphere 15.4
1911 Female, age 85, right hemisphere 12.8
1898 Male, age 80, left hemisphere 12.2
2621 Female, age 67, right hemisphere 11.2
2529 Female, age 94, left hemisphere 10.7
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 13.9
2528 Male, age 74, both hemispheres 15.5
2530 Female, age 94, left hemisphere 15.3
2010 Male, age 76, both hemispheres 15.0
2531 Female, age 67, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.6
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 12.2
1787 Male, age 76, left hemisphere 15.7
2764 Male, age 80, right hemisphere 14.5
2117 Female, age 91, right hemisphere 12.9
1938 Female, age 85, left hemisphere 10.6
2686 Male, age 75, right hemisphere 9.9
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 13.6
2045 Male, age 76, both hemispheres 14.9
1873 Female, age 85, both hemispheres 14.4
2082 Female, age 91, right hemisphere 13.4
2527 Male, age 74, both hemispheres 12.6
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 13.1
1963 Male, age 80, left hemisphere 16.7
1940 Female, age 85, left hemisphere 13.0
2249 Male, age 74, both hemispheres 13.0
1892 Male, age 76, both hemispheres 12.6
2113 Female, age 91, right hemisphere 12.0
2437 Female, age 94, left hemisphere 11.3
Hippocampus, CA3
nTPM: 10.9
1891 Female, age 85, both hemispheres 14.4
2620 Female, age 94, left hemisphere 13.6
2436 Male, age 74, both hemispheres 10.6
2861 Female, age 67, both hemispheres 10.1
1867 Male, age 76, both hemispheres 8.8
2137 Male, age 80, left hemisphere 7.9
Parahippocampal cortex
nTPM: 13.1
1850 Male, age 80, both hemispheres 16.7
1933 Female, age 85, both hemispheres 15.9
2250 Female, age 67, right hemisphere 13.7
2532 Female, age 72, left hemisphere 13.5
1990 Female, age 91, right hemisphere 13.0
2693 Female, age 94, both hemispheres 12.9
2018 Male, age 76, both hemispheres 12.3
2245 Female, age 91, both hemispheres 12.1
2692 Male, age 74, both hemispheres 11.6
2622 Female, age 67, right hemisphere 9.2
Perirhinal gyrus
nTPM: 15.9
2848 Male, age 76, right hemisphere 21.6
1841 Female, age 85, right hemisphere 17.2
1794 Male, age 80, right hemisphere 14.4
2521 Female, age 94, right hemisphere 14.2
1847 Female, age 91, left hemisphere 12.1
Subiculum
nTPM: 12.3
2042 Male, age 76, both hemispheres 14.3
1977 Female, age 85, both hemispheres 13.7
1901 Male, age 80, both hemispheres 12.4
2619 Male, age 74, both hemispheres 11.9
2729 Female, age 91, right hemisphere 11.9
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.9
Samples: 197

Max nTPM: 28.0
Min nTPM: 3.7
Std nTPM: 4.5
Median nTPM: 14.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 26.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 23.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 23.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 23.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 23.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 22.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 22.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 21.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.2
FF:10153-102I9 76 years, female 107.7
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 43.0
Min nTPM: 22.6
Sample A Female 43.0
Sample B Female 36.4
Sample C Male 32.1
Sample D Male 22.6
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 43.2
Min nTPM: 31.6
Sample A Female 42.7
Sample B Female 36.4
Sample C Male 43.2
Sample D Male 31.6
Subiculum
nTPM: 35.2
Samples: 4

Max nTPM: 40.7
Min nTPM: 29.5
Sample A Female 40.7
Sample B Female 33.7
Sample C Male 29.5
Sample D Male 36.9
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 39.3
Min nTPM: 22.2
Sample A Female 38.8
Sample B Female 22.2
Sample C Male 33.2
Sample D Male 39.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 42.8
Min nTPM: 23.6
Sample A Male 23.6
Sample B Male 33.1
Sample C Female 31.2
Sample D Female 42.8
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.0
Sample A Male 21.2
Sample B Male 21.0
Sample C Female 18.0
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
71378456 Antisense, RP_050510_03_F09, Mouse strain C57BL/6J (56 days, male) 4.4
74743303 Antisense, RP_060220_04_E12, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.