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JAKMIP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.6 nTPM
HPA:21.6 nTPM
GTEx:38.8 nTPM
FANTOM5:58.1 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:45.4 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044570
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
1898 Male, age 80, left hemisphere 18.1
2621 Female, age 67, right hemisphere 17.7
2148 Female, age 91, left hemisphere 16.7
1911 Female, age 85, right hemisphere 15.5
1855 Male, age 76, left hemisphere 13.6
2529 Female, age 94, left hemisphere 13.0
Dentate gyrus
nTPM: 17.5
2531 Female, age 67, both hemispheres 22.6
1927 Female, age 91, both hemispheres 22.3
2246 Female, age 85, both hemispheres 18.6
2010 Male, age 76, both hemispheres 16.1
2530 Female, age 94, left hemisphere 13.9
2528 Male, age 74, both hemispheres 11.5
Entorhinal gyrus
nTPM: 17.9
2613 Female, age 94, left hemisphere 26.1
1938 Female, age 85, left hemisphere 20.6
1787 Male, age 76, left hemisphere 20.5
2764 Male, age 80, right hemisphere 17.5
2686 Male, age 75, right hemisphere 12.6
2117 Female, age 91, right hemisphere 10.3
Hippocampus, CA1
nTPM: 21.5
2749 Male, age 80, left hemisphere 40.1
2045 Male, age 76, both hemispheres 19.6
1873 Female, age 85, both hemispheres 17.9
2527 Male, age 74, both hemispheres 16.3
2082 Female, age 91, right hemisphere 13.8
Hippocampus, CA2
nTPM: 16.0
1892 Male, age 76, both hemispheres 22.3
1963 Male, age 80, left hemisphere 18.7
1940 Female, age 85, left hemisphere 14.5
2437 Female, age 94, left hemisphere 14.4
2249 Male, age 74, both hemispheres 14.1
2113 Female, age 91, right hemisphere 12.2
Hippocampus, CA3
nTPM: 21.6
2137 Male, age 80, left hemisphere 36.2
2620 Female, age 94, left hemisphere 27.5
1867 Male, age 76, both hemispheres 20.6
2861 Female, age 67, both hemispheres 20.3
1891 Female, age 85, both hemispheres 14.1
2436 Male, age 74, both hemispheres 11.2
Parahippocampal cortex
nTPM: 17.4
2245 Female, age 91, both hemispheres 25.4
1990 Female, age 91, right hemisphere 19.4
2250 Female, age 67, right hemisphere 18.9
2693 Female, age 94, both hemispheres 17.2
2532 Female, age 72, left hemisphere 17.1
1850 Male, age 80, both hemispheres 17.0
1933 Female, age 85, both hemispheres 17.0
2622 Female, age 67, right hemisphere 15.9
2018 Male, age 76, both hemispheres 14.9
2692 Male, age 74, both hemispheres 11.4
Perirhinal gyrus
nTPM: 18.9
1847 Female, age 91, left hemisphere 24.7
1794 Male, age 80, right hemisphere 18.1
2521 Female, age 94, right hemisphere 17.8
2848 Male, age 76, right hemisphere 17.4
1841 Female, age 85, right hemisphere 16.6
Subiculum
nTPM: 15.1
1901 Male, age 80, both hemispheres 20.0
2438 Female, age 94, left hemisphere 18.2
1977 Female, age 85, both hemispheres 17.9
2042 Male, age 76, both hemispheres 11.7
2729 Female, age 91, right hemisphere 11.6
2619 Male, age 74, both hemispheres 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.8
Samples: 197

Max nTPM: 101.5
Min nTPM: 2.8
Std nTPM: 21.0
Median nTPM: 40.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 88.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 87.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 82.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 82.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 80.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 78.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 77.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 76.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 74.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.1
FF:10169-103B7 60 years, female 72.1
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.2
Sample A Female 18.0
Sample B Female 18.5
Sample C Male 12.2
Sample D Male 14.6
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 23.1
Min nTPM: 17.8
Sample A Female 23.1
Sample B Female 17.8
Sample C Male 22.5
Sample D Male 19.8
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 23.8
Min nTPM: 15.6
Sample A Female 23.8
Sample B Female 17.3
Sample C Male 17.9
Sample D Male 15.6
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 13.8
Sample A Female 14.5
Sample B Female 13.8
Sample C Male 20.5
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 49.8
Min nTPM: 41.4
Sample A Male 43.5
Sample B Male 49.8
Sample C Female 41.4
Sample D Female 47.0
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 46.5
Min nTPM: 36.3
Sample A Male 36.7
Sample B Male 46.5
Sample C Female 39.7
Sample D Female 36.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
71281710 Antisense, RP_050818_02_F04, Mouse strain C57BL/6J (56 days, male) 14.0

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The Human Protein Atlas

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