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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:60.1 nTPM
HPA:60.1 nTPM
GTEx:28.4 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:21.6 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2529 Female, age 94, left hemisphere 36.1
1898 Male, age 80, left hemisphere 22.9
1911 Female, age 85, right hemisphere 21.9
2621 Female, age 67, right hemisphere 17.3
1855 Male, age 76, left hemisphere 16.9
2148 Female, age 91, left hemisphere 15.6
Dentate gyrus
nTPM: 19.0
2530 Female, age 94, left hemisphere 30.2
1927 Female, age 91, both hemispheres 20.9
2246 Female, age 85, both hemispheres 20.7
2010 Male, age 76, both hemispheres 20.6
2531 Female, age 67, both hemispheres 13.1
2528 Male, age 74, both hemispheres 8.4
Entorhinal gyrus
nTPM: 18.5
2764 Male, age 80, right hemisphere 24.1
1938 Female, age 85, left hemisphere 24.0
2613 Female, age 94, left hemisphere 21.7
1787 Male, age 76, left hemisphere 15.8
2686 Male, age 75, right hemisphere 13.5
2117 Female, age 91, right hemisphere 12.1
Hippocampus, CA1
nTPM: 23.2
2749 Male, age 80, left hemisphere 55.4
1873 Female, age 85, both hemispheres 17.6
2045 Male, age 76, both hemispheres 16.2
2527 Male, age 74, both hemispheres 13.9
2082 Female, age 91, right hemisphere 12.7
Hippocampus, CA2
nTPM: 22.3
1892 Male, age 76, both hemispheres 39.6
2437 Female, age 94, left hemisphere 38.9
1963 Male, age 80, left hemisphere 21.5
2113 Female, age 91, right hemisphere 12.6
1940 Female, age 85, left hemisphere 11.0
2249 Male, age 74, both hemispheres 10.1
Hippocampus, CA3
nTPM: 27.2
2137 Male, age 80, left hemisphere 68.8
1867 Male, age 76, both hemispheres 33.8
1891 Female, age 85, both hemispheres 23.4
2861 Female, age 67, both hemispheres 15.5
2436 Male, age 74, both hemispheres 11.2
2620 Female, age 94, left hemisphere 10.8
Parahippocampal cortex
nTPM: 14.9
2245 Female, age 91, both hemispheres 22.6
1850 Male, age 80, both hemispheres 19.3
1990 Female, age 91, right hemisphere 17.4
2692 Male, age 74, both hemispheres 14.0
2622 Female, age 67, right hemisphere 13.9
2532 Female, age 72, left hemisphere 13.6
2250 Female, age 67, right hemisphere 13.5
1933 Female, age 85, both hemispheres 13.3
2018 Male, age 76, both hemispheres 12.9
2693 Female, age 94, both hemispheres 8.2
Perirhinal gyrus
nTPM: 13.8
1847 Female, age 91, left hemisphere 20.6
2848 Male, age 76, right hemisphere 15.4
1794 Male, age 80, right hemisphere 13.5
1841 Female, age 85, right hemisphere 12.9
2521 Female, age 94, right hemisphere 6.8
Subiculum
nTPM: 60.1
2438 Female, age 94, left hemisphere 249.4
1901 Male, age 80, both hemispheres 44.1
2042 Male, age 76, both hemispheres 23.4
1977 Female, age 85, both hemispheres 22.2
2619 Male, age 74, both hemispheres 12.0
2729 Female, age 91, right hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 107.3
Min nTPM: 0.4
Std nTPM: 21.4
Median nTPM: 23.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 107.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 104.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 99.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 94.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 89.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 82.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 77.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 76.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 76.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 74.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 71.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 30.1
Min nTPM: 15.6
Sample A Female 20.3
Sample B Female 19.2
Sample C Male 30.1
Sample D Male 15.6
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 12.2
Min nTPM: 7.1
Sample A Female 7.1
Sample B Female 7.2
Sample C Male 7.7
Sample D Male 12.2
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 20.5
Min nTPM: 4.8
Sample A Female 11.8
Sample B Female 6.9
Sample C Male 20.5
Sample D Male 4.8
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.2
Sample A Female 15.6
Sample B Female 15.2
Sample C Male 20.6
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.3
Sample A Male 21.4
Sample B Male 24.3
Sample C Female 23.3
Sample D Female 17.3
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.7
Sample A Male 18.4
Sample B Male 22.9
Sample C Female 13.7
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
75651163 Antisense, RP_060518_01_A08, Mouse strain C57BL/6J (56 days, male) 4.5
68844839 Antisense, RP_050222_02_E09, Mouse strain C57BL/6J (56 days, male) 3.6

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