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UBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:17.8 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:31.4 nTPM
Mouse:23.9 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
1898 Male, age 80, left hemisphere 19.3
2148 Female, age 91, left hemisphere 18.9
2621 Female, age 67, right hemisphere 17.9
1911 Female, age 85, right hemisphere 17.5
1855 Male, age 76, left hemisphere 16.0
2529 Female, age 94, left hemisphere 16.0
Dentate gyrus
nTPM: 17.8
1927 Female, age 91, both hemispheres 22.3
2531 Female, age 67, both hemispheres 19.4
2528 Male, age 74, both hemispheres 17.3
2246 Female, age 85, both hemispheres 16.4
2010 Male, age 76, both hemispheres 16.3
2530 Female, age 94, left hemisphere 15.4
Entorhinal gyrus
nTPM: 18.4
2613 Female, age 94, left hemisphere 21.0
1938 Female, age 85, left hemisphere 20.9
2764 Male, age 80, right hemisphere 19.8
1787 Male, age 76, left hemisphere 18.4
2686 Male, age 75, right hemisphere 15.7
2117 Female, age 91, right hemisphere 14.8
Hippocampus, CA1
nTPM: 19.3
2749 Male, age 80, left hemisphere 22.3
2045 Male, age 76, both hemispheres 22.0
1873 Female, age 85, both hemispheres 18.1
2527 Male, age 74, both hemispheres 17.2
2082 Female, age 91, right hemisphere 16.6
Hippocampus, CA2
nTPM: 18.4
1892 Male, age 76, both hemispheres 20.3
1963 Male, age 80, left hemisphere 19.6
1940 Female, age 85, left hemisphere 19.5
2113 Female, age 91, right hemisphere 17.1
2249 Male, age 74, both hemispheres 16.9
2437 Female, age 94, left hemisphere 16.8
Hippocampus, CA3
nTPM: 19.4
2137 Male, age 80, left hemisphere 24.2
2861 Female, age 67, both hemispheres 19.9
1867 Male, age 76, both hemispheres 19.8
2620 Female, age 94, left hemisphere 19.3
1891 Female, age 85, both hemispheres 17.6
2436 Male, age 74, both hemispheres 15.4
Parahippocampal cortex
nTPM: 18.1
1850 Male, age 80, both hemispheres 21.5
2693 Female, age 94, both hemispheres 19.2
1933 Female, age 85, both hemispheres 18.7
1990 Female, age 91, right hemisphere 18.3
2250 Female, age 67, right hemisphere 18.3
2532 Female, age 72, left hemisphere 17.6
2245 Female, age 91, both hemispheres 17.4
2622 Female, age 67, right hemisphere 17.3
2692 Male, age 74, both hemispheres 16.6
2018 Male, age 76, both hemispheres 16.1
Perirhinal gyrus
nTPM: 21.2
1794 Male, age 80, right hemisphere 22.4
1847 Female, age 91, left hemisphere 22.0
1841 Female, age 85, right hemisphere 21.4
2848 Male, age 76, right hemisphere 20.6
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 16.4
1977 Female, age 85, both hemispheres 18.7
1901 Male, age 80, both hemispheres 17.8
2729 Female, age 91, right hemisphere 16.4
2438 Female, age 94, left hemisphere 16.1
2619 Male, age 74, both hemispheres 15.4
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 30.6
Min nTPM: 10.9
Std nTPM: 3.9
Median nTPM: 17.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 30.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 28.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 28.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 26.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 26.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 26.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.7
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 32.7
Min nTPM: 28.9
Sample A Female 32.7
Sample B Female 30.3
Sample C Male 29.5
Sample D Male 28.9
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 33.0
Min nTPM: 29.8
Sample A Female 33.0
Sample B Female 31.5
Sample C Male 31.4
Sample D Male 29.8
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 36.3
Min nTPM: 26.7
Sample A Female 36.3
Sample B Female 26.7
Sample C Male 28.4
Sample D Male 28.3
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.2
Sample A Female 27.6
Sample B Female 27.2
Sample C Male 29.3
Sample D Male 33.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 19.9
Sample A Male 19.9
Sample B Male 27.3
Sample C Female 23.1
Sample D Female 25.3
Hippocampal formation
nTPM: 22.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 18.7
Sample A Male 24.7
Sample B Male 23.9
Sample C Female 18.7
Sample D Female 21.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
69290704 Antisense, RP_050407_04_E10, Mouse strain C57BL/6J (56 days, male) 9.9

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The Human Protein Atlas

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