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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:121.0 nTPM
HPA:121.0 nTPM
GTEx:91.9 nTPM
FANTOM5:371.7 Scaled Tags Per Million
Pig:213.3 nTPM
Mouse:180.5 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019128Antibody HPA057255
Glial cells Not detectedLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.0
Sample id Sample description nTPM
Hippocampus
nTPM: 83.3
1855 Male, age 76, left hemisphere 111.1
1898 Male, age 80, left hemisphere 111.0
2621 Female, age 67, right hemisphere 88.0
1911 Female, age 85, right hemisphere 78.3
2148 Female, age 91, left hemisphere 57.0
2529 Female, age 94, left hemisphere 54.1
Dentate gyrus
nTPM: 87.4
2010 Male, age 76, both hemispheres 111.6
2246 Female, age 85, both hemispheres 106.1
1927 Female, age 91, both hemispheres 96.2
2531 Female, age 67, both hemispheres 84.3
2530 Female, age 94, left hemisphere 77.6
2528 Male, age 74, both hemispheres 48.5
Entorhinal gyrus
nTPM: 92.8
1938 Female, age 85, left hemisphere 128.5
2764 Male, age 80, right hemisphere 106.1
2613 Female, age 94, left hemisphere 103.5
1787 Male, age 76, left hemisphere 98.5
2686 Male, age 75, right hemisphere 63.1
2117 Female, age 91, right hemisphere 57.0
Hippocampus, CA1
nTPM: 119.0
2749 Male, age 80, left hemisphere 210.1
1873 Female, age 85, both hemispheres 113.4
2082 Female, age 91, right hemisphere 106.7
2045 Male, age 76, both hemispheres 91.9
2527 Male, age 74, both hemispheres 72.7
Hippocampus, CA2
nTPM: 88.7
1892 Male, age 76, both hemispheres 140.1
1963 Male, age 80, left hemisphere 103.6
1940 Female, age 85, left hemisphere 88.3
2113 Female, age 91, right hemisphere 87.0
2249 Male, age 74, both hemispheres 58.8
2437 Female, age 94, left hemisphere 54.7
Hippocampus, CA3
nTPM: 95.7
2137 Male, age 80, left hemisphere 178.8
1867 Male, age 76, both hemispheres 110.3
2620 Female, age 94, left hemisphere 81.1
1891 Female, age 85, both hemispheres 77.4
2861 Female, age 67, both hemispheres 71.6
2436 Male, age 74, both hemispheres 54.9
Parahippocampal cortex
nTPM: 89.5
1850 Male, age 80, both hemispheres 126.0
1933 Female, age 85, both hemispheres 116.4
2018 Male, age 76, both hemispheres 104.6
1990 Female, age 91, right hemisphere 98.6
2245 Female, age 91, both hemispheres 96.0
2532 Female, age 72, left hemisphere 88.6
2250 Female, age 67, right hemisphere 77.6
2693 Female, age 94, both hemispheres 70.5
2622 Female, age 67, right hemisphere 66.6
2692 Male, age 74, both hemispheres 50.4
Perirhinal gyrus
nTPM: 121.0
1847 Female, age 91, left hemisphere 162.4
1794 Male, age 80, right hemisphere 122.4
1841 Female, age 85, right hemisphere 117.6
2848 Male, age 76, right hemisphere 113.6
2521 Female, age 94, right hemisphere 88.9
Subiculum
nTPM: 78.3
1977 Female, age 85, both hemispheres 117.8
1901 Male, age 80, both hemispheres 110.1
2042 Male, age 76, both hemispheres 84.8
2438 Female, age 94, left hemisphere 65.8
2729 Female, age 91, right hemisphere 49.3
2619 Male, age 74, both hemispheres 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.9
Samples: 197

Max nTPM: 269.7
Min nTPM: 10.6
Std nTPM: 44.5
Median nTPM: 81.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 269.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 259.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 239.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 216.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 208.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 201.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 197.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 197.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 174.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 173.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 172.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 371.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 371.7
FF:10169-103B7 60 years, female 424.8
FF:10153-102I9 76 years, female 318.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 213.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 169.3
Samples: 4

Max nTPM: 259.2
Min nTPM: 96.5
Sample A Female 259.2
Sample B Female 215.3
Sample C Male 96.5
Sample D Male 106.1
Entorhinal cortex
nTPM: 66.0
Samples: 4

Max nTPM: 74.5
Min nTPM: 54.5
Sample A Female 74.5
Sample B Female 60.8
Sample C Male 74.0
Sample D Male 54.5
Subiculum
nTPM: 158.0
Samples: 4

Max nTPM: 200.8
Min nTPM: 115.0
Sample A Female 200.8
Sample B Female 137.5
Sample C Male 178.6
Sample D Male 115.0
Ventral hippocampus
nTPM: 213.4
Samples: 4

Max nTPM: 268.0
Min nTPM: 93.9
Sample A Female 268.0
Sample B Female 93.9
Sample C Male 233.9
Sample D Male 257.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 180.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 126.7
Samples: 4

Max nTPM: 156.9
Min nTPM: 108.7
Sample A Male 109.7
Sample B Male 108.7
Sample C Female 131.4
Sample D Female 156.9
Hippocampal formation
nTPM: 180.6
Samples: 4

Max nTPM: 199.7
Min nTPM: 160.6
Sample A Male 167.2
Sample B Male 194.8
Sample C Female 199.7
Sample D Female 160.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
71808699 Antisense, RP_050926_02_H12, Mouse strain C57BL/6J (56 days, male) 14.3

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The Human Protein Atlas

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