ABOUTMENU
HELP
NEWS
CCSAP
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		44.451
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:14.5 nTPM
FANTOM5:111.9 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:38.2 nTPM
Allen mouse:8.5 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA028402
Amygdala mean intensity 44.451
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 33.481
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 22.227
Cortical amygdala 44.451
Central amygdala 18.246
Medial amygdaloid nucleus 41.983

AMYGDALA - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Amygdala
nTPM: 13.1
2814 Male, age 76, right hemisphere 18.2
2514 Male, age 75, right hemisphere 13.2
2517 Female, age 94, left hemisphere 13.2
1987 Female, age 91, left hemisphere 10.7
2695 Female, age 67, right hemisphere 10.3
Basal amygdala
nTPM: 13.5
1955 Male, age 76, both hemispheres 17.2
2110 Male, age 80, left hemisphere 15.7
2685 Female, age 94, left hemisphere 14.2
2243 Female, age 91, right hemisphere 12.7
2609 Male, age 75, right hemisphere 10.5
2827 Female, age 67, right hemisphere 10.5
Central amygdala
nTPM: 11.8
1905 Male, age 76, both hemispheres 18.8
2239 Male, age 80, left hemisphere 14.3
2515 Male, age 75, right hemisphere 9.0
2701 Female, age 91, right hemisphere 8.9
2826 Female, age 94, left hemisphere 8.2
Corticomedial amygdala
nTPM: 15.0
2240 Male, age 76, both hemispheres 19.5
2429 Female, age 94, left hemisphere 17.0
2829 Male, age 80, left hemisphere 16.8
2242 Female, age 91, right hemisphere 13.2
2535 Female, age 67, right hemisphere 12.9
2428 Male, age 75, right hemisphere 10.5
Lateral amygdala
nTPM: 11.4
1883 Male, age 76, both hemispheres 16.1
2534 Female, age 94, left hemisphere 14.1
2256 Male, age 80, left hemisphere 12.3
2516 Male, age 75, right hemisphere 10.9
2255 Female, age 91, right hemisphere 8.3
2830 Female, age 67, right hemisphere 6.9
Stria terminalis, bed nucleus
nTPM: 16.4
2486 Female, age 94, both hemispheres 22.2
1974 Female, age 91, both hemispheres 17.9
2201 Male, age 74, unknown 9.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 14.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 14.5
Samples: 152

Max nTPM: 30.7
Min nTPM: 3.4
Std nTPM: 4.2
Median nTPM: 14.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 30.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 30.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 28.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 26.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 25.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 25.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 24.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 23.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 22.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 21.9
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 21.1
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 111.9
FF:10151-102I7 76 years, female 111.9

AMYGDALA - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Amygdala
nTPM: 21.0
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.4
Sample A Female 25.0
Sample B Female 19.0
Sample C Male 18.4
Sample D Male 21.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 38.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 37.1
Sample A Male 37.1
Sample B Male 39.1
Sample C Female 38.0
Sample D Female 38.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.5
67792205 Antisense, RP_040920_01_E01, Mouse strain C57BL/6J (56 days, male) 8.6
70743908 Antisense, RP_050725_02_A12, Mouse strain C57BL/6J (56 days, male) 8.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.