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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:8.0 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:4.2 nTPM
Mouse:2.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1855 Male, age 76, left hemisphere 13.4
1898 Male, age 80, left hemisphere 13.0
1911 Female, age 85, right hemisphere 12.7
2529 Female, age 94, left hemisphere 12.6
2621 Female, age 67, right hemisphere 12.5
2148 Female, age 91, left hemisphere 12.4
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 13.4
2010 Male, age 76, both hemispheres 13.3
2531 Female, age 67, both hemispheres 13.2
2246 Female, age 85, both hemispheres 13.0
1927 Female, age 91, both hemispheres 12.9
2528 Male, age 74, both hemispheres 12.3
Entorhinal gyrus
nTPM: 12.4
1787 Male, age 76, left hemisphere 12.9
1938 Female, age 85, left hemisphere 12.7
2117 Female, age 91, right hemisphere 12.4
2686 Male, age 75, right hemisphere 12.4
2764 Male, age 80, right hemisphere 12.0
2613 Female, age 94, left hemisphere 11.7
Hippocampus, CA1
nTPM: 13.0
2045 Male, age 76, both hemispheres 14.0
1873 Female, age 85, both hemispheres 13.9
2527 Male, age 74, both hemispheres 12.7
2082 Female, age 91, right hemisphere 12.5
2749 Male, age 80, left hemisphere 11.9
Hippocampus, CA2
nTPM: 12.6
1940 Female, age 85, left hemisphere 13.3
2437 Female, age 94, left hemisphere 12.9
2249 Male, age 74, both hemispheres 12.8
1892 Male, age 76, both hemispheres 12.7
1963 Male, age 80, left hemisphere 12.1
2113 Female, age 91, right hemisphere 12.0
Hippocampus, CA3
nTPM: 12.7
1867 Male, age 76, both hemispheres 13.5
2861 Female, age 67, both hemispheres 13.2
1891 Female, age 85, both hemispheres 12.6
2620 Female, age 94, left hemisphere 12.5
2436 Male, age 74, both hemispheres 12.3
2137 Male, age 80, left hemisphere 11.9
Parahippocampal cortex
nTPM: 12.7
2018 Male, age 76, both hemispheres 14.5
1933 Female, age 85, both hemispheres 13.6
2250 Female, age 67, right hemisphere 13.2
2532 Female, age 72, left hemisphere 12.8
1850 Male, age 80, both hemispheres 12.7
2245 Female, age 91, both hemispheres 12.5
2693 Female, age 94, both hemispheres 12.5
1990 Female, age 91, right hemisphere 12.0
2692 Male, age 74, both hemispheres 11.9
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 12.4
2848 Male, age 76, right hemisphere 12.8
2521 Female, age 94, right hemisphere 12.7
1794 Male, age 80, right hemisphere 12.2
1841 Female, age 85, right hemisphere 12.2
1847 Female, age 91, left hemisphere 12.2
Subiculum
nTPM: 12.6
2042 Male, age 76, both hemispheres 13.7
1977 Female, age 85, both hemispheres 12.7
2729 Female, age 91, right hemisphere 12.7
2438 Female, age 94, left hemisphere 12.5
1901 Male, age 80, both hemispheres 12.3
2619 Male, age 74, both hemispheres 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 197

Max nTPM: 43.7
Min nTPM: 1.2
Std nTPM: 6.4
Median nTPM: 6.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 43.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 42.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 31.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 26.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 24.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 21.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.5
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 14.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 5.0
Min nTPM: 2.6
Sample A Female 3.3
Sample B Female 2.6
Sample C Male 3.0
Sample D Male 5.0
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 3.6
Sample C Male 2.7
Sample D Male 4.5
Subiculum
nTPM: 3.0
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.8
Sample A Female 2.5
Sample B Female 1.8
Sample C Male 3.2
Sample D Male 4.5
Ventral hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.5
Sample A Female 5.1
Sample B Female 3.5
Sample C Male 4.3
Sample D Male 3.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.3
Sample A Male 2.9
Sample B Male 2.3
Sample C Female 2.5
Sample D Female 3.3
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.9
Sample A Male 1.9
Sample B Male 2.3
Sample C Female 3.2
Sample D Female 2.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70300252 Antisense, RP_050607_01_B01, Mouse strain C57BL/6J (56 days, male) 0.0

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