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MMS19
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:45.1 nTPM
HPA:45.1 nTPM
GTEx:29.8 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:1.4 nTPM
Allen mouse:2.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 45.1
Sample id Sample description nTPM
Amygdala
nTPM: 44.5
2514 Male, age 75, right hemisphere 46.6
2517 Female, age 94, left hemisphere 44.2
2814 Male, age 76, right hemisphere 44.2
2695 Female, age 67, right hemisphere 44.0
1987 Female, age 91, left hemisphere 43.3
Basal amygdala
nTPM: 44.4
2609 Male, age 75, right hemisphere 46.5
2685 Female, age 94, left hemisphere 45.0
2243 Female, age 91, right hemisphere 44.6
1955 Male, age 76, both hemispheres 44.0
2110 Male, age 80, left hemisphere 43.5
2827 Female, age 67, right hemisphere 42.5
Central amygdala
nTPM: 44.9
2515 Male, age 75, right hemisphere 46.3
2826 Female, age 94, left hemisphere 45.5
1905 Male, age 76, both hemispheres 44.8
2239 Male, age 80, left hemisphere 44.5
2701 Female, age 91, right hemisphere 43.5
Corticomedial amygdala
nTPM: 45.1
2829 Male, age 80, left hemisphere 46.2
2240 Male, age 76, both hemispheres 45.4
2428 Male, age 75, right hemisphere 45.4
2242 Female, age 91, right hemisphere 45.3
2429 Female, age 94, left hemisphere 44.3
2535 Female, age 67, right hemisphere 44.2
Lateral amygdala
nTPM: 44.1
2516 Male, age 75, right hemisphere 45.5
2534 Female, age 94, left hemisphere 45.5
1883 Male, age 76, both hemispheres 44.4
2256 Male, age 80, left hemisphere 43.6
2255 Female, age 91, right hemisphere 43.4
2830 Female, age 67, right hemisphere 42.2
Stria terminalis, bed nucleus
nTPM: 45.1
1974 Female, age 91, both hemispheres 46.4
2486 Female, age 94, both hemispheres 45.6
2201 Male, age 74, unknown 43.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 29.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 29.8
Samples: 152

Max nTPM: 48.8
Min nTPM: 18.2
Std nTPM: 5.5
Median nTPM: 29.8
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 48.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 47.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 43.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 42.8
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 42.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 41.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 41.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 40.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 38.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 38.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 38.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 52.9
FF:10151-102I7 76 years, female 52.9

AMYGDALA - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Amygdala
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 10.1
Sample A Female 12.4
Sample B Female 10.1
Sample C Male 10.7
Sample D Male 10.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 1.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 1.5
Samples: 4

Max nTPM: 2.8
Min nTPM: 0.2
Sample A Male 2.8
Sample B Male 2.0
Sample C Female 0.8
Sample D Female 0.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.4
68797709 Antisense, RP_050215_01_A03, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.