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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:22.1 nTPM
HPA:22.1 nTPM
GTEx:16.6 nTPM
FANTOM5:50.7 Scaled Tags Per Million
Pig:16.4 nTPM
Mouse:38.4 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006139Antibody HPA006140Antibody CAB017368
Glial cells Not detectedMediumHigh
Neuronal cells MediumHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 23.9
2529 Female, age 94, left hemisphere 23.2
2621 Female, age 67, right hemisphere 20.5
1911 Female, age 85, right hemisphere 20.2
2148 Female, age 91, left hemisphere 19.8
1855 Male, age 76, left hemisphere 19.1
Dentate gyrus
nTPM: 22.1
2010 Male, age 76, both hemispheres 28.1
2530 Female, age 94, left hemisphere 25.5
2528 Male, age 74, both hemispheres 21.3
2246 Female, age 85, both hemispheres 19.7
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 18.9
Entorhinal gyrus
nTPM: 18.7
2117 Female, age 91, right hemisphere 22.8
1787 Male, age 76, left hemisphere 20.3
1938 Female, age 85, left hemisphere 19.9
2764 Male, age 80, right hemisphere 17.9
2686 Male, age 75, right hemisphere 16.1
2613 Female, age 94, left hemisphere 15.0
Hippocampus, CA1
nTPM: 20.7
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 22.1
2082 Female, age 91, right hemisphere 20.4
2527 Male, age 74, both hemispheres 20.1
2749 Male, age 80, left hemisphere 18.9
Hippocampus, CA2
nTPM: 21.2
2249 Male, age 74, both hemispheres 25.4
1963 Male, age 80, left hemisphere 21.4
1940 Female, age 85, left hemisphere 21.2
2113 Female, age 91, right hemisphere 20.2
2437 Female, age 94, left hemisphere 19.7
1892 Male, age 76, both hemispheres 19.1
Hippocampus, CA3
nTPM: 20.0
1867 Male, age 76, both hemispheres 24.9
2436 Male, age 74, both hemispheres 22.5
1891 Female, age 85, both hemispheres 20.2
2861 Female, age 67, both hemispheres 17.9
2620 Female, age 94, left hemisphere 17.6
2137 Male, age 80, left hemisphere 17.1
Parahippocampal cortex
nTPM: 18.9
2018 Male, age 76, both hemispheres 25.7
2250 Female, age 67, right hemisphere 20.0
1990 Female, age 91, right hemisphere 19.6
1933 Female, age 85, both hemispheres 19.3
2245 Female, age 91, both hemispheres 19.3
2532 Female, age 72, left hemisphere 18.9
2692 Male, age 74, both hemispheres 17.9
1850 Male, age 80, both hemispheres 17.7
2693 Female, age 94, both hemispheres 15.2
2622 Female, age 67, right hemisphere 15.0
Perirhinal gyrus
nTPM: 17.8
1841 Female, age 85, right hemisphere 18.5
1847 Female, age 91, left hemisphere 18.5
2521 Female, age 94, right hemisphere 17.6
2848 Male, age 76, right hemisphere 17.3
1794 Male, age 80, right hemisphere 17.0
Subiculum
nTPM: 21.2
2042 Male, age 76, both hemispheres 26.5
2729 Female, age 91, right hemisphere 21.8
2438 Female, age 94, left hemisphere 20.4
1901 Male, age 80, both hemispheres 20.3
1977 Female, age 85, both hemispheres 20.0
2619 Male, age 74, both hemispheres 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 79.9
Min nTPM: 7.4
Std nTPM: 8.4
Median nTPM: 14.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 79.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 49.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 41.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 38.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 38.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 37.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 35.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 34.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.7
FF:10153-102I9 76 years, female 55.4
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.7
Sample A Female 20.6
Sample B Female 15.8
Sample C Male 16.4
Sample D Male 12.7
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.6
Sample A Female 16.1
Sample B Female 15.0
Sample C Male 14.8
Sample D Male 11.6
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 18.4
Min nTPM: 13.6
Sample A Female 18.4
Sample B Female 14.3
Sample C Male 13.6
Sample D Male 14.7
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.4
Sample A Female 14.5
Sample B Female 11.4
Sample C Male 17.8
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 36.3
Min nTPM: 28.3
Sample A Male 28.3
Sample B Male 29.0
Sample C Female 35.5
Sample D Female 36.3
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 48.0
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 33.3
Sample C Female 42.6
Sample D Female 48.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69540272 Antisense, RP_050426_01_D10, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

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