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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.3 nTPM
HPA:11.3 nTPM
GTEx:12.8 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:81.4 nTPM
Mouse:80.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024771Antibody HPA024779
Glial cells MediumLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.3
Sample id Sample description nTPM
Hippocampus
nTPM: 5.9
1898 Male, age 80, left hemisphere 12.3
1911 Female, age 85, right hemisphere 6.7
1855 Male, age 76, left hemisphere 5.4
2148 Female, age 91, left hemisphere 4.1
2621 Female, age 67, right hemisphere 4.0
2529 Female, age 94, left hemisphere 2.7
Dentate gyrus
nTPM: 7.4
1927 Female, age 91, both hemispheres 14.4
2531 Female, age 67, both hemispheres 7.3
2246 Female, age 85, both hemispheres 7.0
2530 Female, age 94, left hemisphere 6.2
2010 Male, age 76, both hemispheres 5.2
2528 Male, age 74, both hemispheres 4.4
Entorhinal gyrus
nTPM: 6.2
1938 Female, age 85, left hemisphere 10.7
2613 Female, age 94, left hemisphere 9.1
1787 Male, age 76, left hemisphere 5.7
2764 Male, age 80, right hemisphere 5.7
2686 Male, age 75, right hemisphere 3.8
2117 Female, age 91, right hemisphere 2.6
Hippocampus, CA1
nTPM: 8.8
2749 Male, age 80, left hemisphere 17.6
1873 Female, age 85, both hemispheres 11.3
2045 Male, age 76, both hemispheres 6.2
2527 Male, age 74, both hemispheres 5.7
2082 Female, age 91, right hemisphere 3.4
Hippocampus, CA2
nTPM: 6.9
1892 Male, age 76, both hemispheres 12.1
1963 Male, age 80, left hemisphere 9.5
2437 Female, age 94, left hemisphere 5.7
1940 Female, age 85, left hemisphere 5.4
2249 Male, age 74, both hemispheres 5.2
2113 Female, age 91, right hemisphere 3.7
Hippocampus, CA3
nTPM: 8.0
2137 Male, age 80, left hemisphere 14.8
2620 Female, age 94, left hemisphere 10.6
1891 Female, age 85, both hemispheres 7.0
1867 Male, age 76, both hemispheres 6.9
2861 Female, age 67, both hemispheres 4.5
2436 Male, age 74, both hemispheres 4.1
Parahippocampal cortex
nTPM: 7.5
1850 Male, age 80, both hemispheres 14.2
2693 Female, age 94, both hemispheres 12.5
1990 Female, age 91, right hemisphere 9.2
2250 Female, age 67, right hemisphere 8.5
1933 Female, age 85, both hemispheres 8.4
2245 Female, age 91, both hemispheres 7.3
2532 Female, age 72, left hemisphere 6.0
2018 Male, age 76, both hemispheres 3.8
2692 Male, age 74, both hemispheres 3.2
2622 Female, age 67, right hemisphere 1.8
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 12.3
1841 Female, age 85, right hemisphere 12.2
2521 Female, age 94, right hemisphere 11.9
1847 Female, age 91, left hemisphere 11.3
2848 Male, age 76, right hemisphere 8.6
Subiculum
nTPM: 4.4
1901 Male, age 80, both hemispheres 9.1
1977 Female, age 85, both hemispheres 5.9
2438 Female, age 94, left hemisphere 5.7
2729 Female, age 91, right hemisphere 3.4
2042 Male, age 76, both hemispheres 1.1
2619 Male, age 74, both hemispheres 1.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 41.4
Min nTPM: 3.1
Std nTPM: 6.9
Median nTPM: 10.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 27.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 26.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 25.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 25.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 25.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.0
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 69.0
Samples: 4

Max nTPM: 79.1
Min nTPM: 57.4
Sample A Female 79.1
Sample B Female 67.1
Sample C Male 72.3
Sample D Male 57.4
Entorhinal cortex
nTPM: 81.4
Samples: 4

Max nTPM: 104.8
Min nTPM: 68.2
Sample A Female 77.1
Sample B Female 104.8
Sample C Male 75.4
Sample D Male 68.2
Subiculum
nTPM: 62.2
Samples: 4

Max nTPM: 79.5
Min nTPM: 54.6
Sample A Female 79.5
Sample B Female 59.4
Sample C Male 54.6
Sample D Male 55.4
Ventral hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 64.0
Min nTPM: 47.0
Sample A Female 64.0
Sample B Female 54.9
Sample C Male 47.0
Sample D Male 63.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 80.2
Samples: 4

Max nTPM: 90.8
Min nTPM: 74.1
Sample A Male 81.6
Sample B Male 90.8
Sample C Female 74.2
Sample D Female 74.1
Hippocampal formation
nTPM: 73.7
Samples: 4

Max nTPM: 84.3
Min nTPM: 62.8
Sample A Male 84.3
Sample B Male 79.2
Sample C Female 68.6
Sample D Female 62.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.