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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:199.4 nTPM
HPA:199.4 nTPM
GTEx:251.1 nTPM
FANTOM5:375.5 Scaled Tags Per Million
Mouse:388.2 nTPM
Allen mouse:20.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043060
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 199.4
Sample id Sample description nTPM
Hippocampus
nTPM: 199.0
1898 Male, age 80, left hemisphere 204.7
2529 Female, age 94, left hemisphere 201.2
2621 Female, age 67, right hemisphere 200.3
1855 Male, age 76, left hemisphere 198.2
1911 Female, age 85, right hemisphere 195.0
2148 Female, age 91, left hemisphere 194.4
Dentate gyrus
nTPM: 197.5
2530 Female, age 94, left hemisphere 207.1
1927 Female, age 91, both hemispheres 200.5
2010 Male, age 76, both hemispheres 200.4
2246 Female, age 85, both hemispheres 196.4
2531 Female, age 67, both hemispheres 191.0
2528 Male, age 74, both hemispheres 189.8
Entorhinal gyrus
nTPM: 195.1
2686 Male, age 75, right hemisphere 200.9
1787 Male, age 76, left hemisphere 196.1
2764 Male, age 80, right hemisphere 195.6
2117 Female, age 91, right hemisphere 195.3
1938 Female, age 85, left hemisphere 194.6
2613 Female, age 94, left hemisphere 188.3
Hippocampus, CA1
nTPM: 197.3
1873 Female, age 85, both hemispheres 201.5
2749 Male, age 80, left hemisphere 201.3
2527 Male, age 74, both hemispheres 195.5
2082 Female, age 91, right hemisphere 194.6
2045 Male, age 76, both hemispheres 193.4
Hippocampus, CA2
nTPM: 199.4
1892 Male, age 76, both hemispheres 204.6
2437 Female, age 94, left hemisphere 201.5
2249 Male, age 74, both hemispheres 201.2
1963 Male, age 80, left hemisphere 201.1
1940 Female, age 85, left hemisphere 194.5
2113 Female, age 91, right hemisphere 193.4
Hippocampus, CA3
nTPM: 196.7
1867 Male, age 76, both hemispheres 203.3
1891 Female, age 85, both hemispheres 200.0
2436 Male, age 74, both hemispheres 199.8
2137 Male, age 80, left hemisphere 196.3
2861 Female, age 67, both hemispheres 191.5
2620 Female, age 94, left hemisphere 189.1
Parahippocampal cortex
nTPM: 196.0
1850 Male, age 80, both hemispheres 204.1
2018 Male, age 76, both hemispheres 200.4
2250 Female, age 67, right hemisphere 198.0
1933 Female, age 85, both hemispheres 197.7
2245 Female, age 91, both hemispheres 195.7
1990 Female, age 91, right hemisphere 194.7
2693 Female, age 94, both hemispheres 194.0
2622 Female, age 67, right hemisphere 192.9
2532 Female, age 72, left hemisphere 192.7
2692 Male, age 74, both hemispheres 190.0
Perirhinal gyrus
nTPM: 198.7
1847 Female, age 91, left hemisphere 204.4
1794 Male, age 80, right hemisphere 200.9
1841 Female, age 85, right hemisphere 200.2
2848 Male, age 76, right hemisphere 196.5
2521 Female, age 94, right hemisphere 191.8
Subiculum
nTPM: 197.0
1901 Male, age 80, both hemispheres 201.9
2438 Female, age 94, left hemisphere 201.9
2042 Male, age 76, both hemispheres 199.8
1977 Female, age 85, both hemispheres 196.1
2619 Male, age 74, both hemispheres 191.7
2729 Female, age 91, right hemisphere 190.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 251.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 251.1
Samples: 197

Max nTPM: 795.9
Min nTPM: 113.1
Std nTPM: 74.8
Median nTPM: 238.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 795.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 490.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 442.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 439.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 419.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 408.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 394.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 388.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 382.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 378.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 352.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 375.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 375.5
FF:10169-103B7 60 years, female 420.6
FF:10153-102I9 76 years, female 330.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 388.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 355.7
Samples: 4

Max nTPM: 366.7
Min nTPM: 348.3
Sample A Male 348.3
Sample B Male 366.7
Sample C Female 355.5
Sample D Female 352.1
Hippocampal formation
nTPM: 388.2
Samples: 4

Max nTPM: 410.1
Min nTPM: 365.7
Sample A Male 410.1
Sample B Male 367.0
Sample C Female 365.7
Sample D Female 409.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.3
293241 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 20.3
323595 Antisense, RP_040609_01_G11, Mouse strain C57BL/6J (56 days, male) 10.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.