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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:122.6 nTPM
HPA:122.6 nTPM
GTEx:113.5 nTPM
FANTOM5:200.4 Scaled Tags Per Million
Pig:166.6 nTPM
Mouse:668.9 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051497Antibody HPA072453
Glial cells Not detectedNot detected
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.6
Sample id Sample description nTPM
Hippocampus
nTPM: 64.5
1898 Male, age 80, left hemisphere 100.1
2621 Female, age 67, right hemisphere 77.9
1855 Male, age 76, left hemisphere 72.8
2148 Female, age 91, left hemisphere 61.8
1911 Female, age 85, right hemisphere 43.6
2529 Female, age 94, left hemisphere 31.0
Dentate gyrus
nTPM: 77.7
1927 Female, age 91, both hemispheres 117.1
2531 Female, age 67, both hemispheres 78.3
2010 Male, age 76, both hemispheres 78.0
2530 Female, age 94, left hemisphere 73.3
2246 Female, age 85, both hemispheres 72.7
2528 Male, age 74, both hemispheres 46.7
Entorhinal gyrus
nTPM: 63.3
2613 Female, age 94, left hemisphere 108.1
2764 Male, age 80, right hemisphere 75.7
1938 Female, age 85, left hemisphere 73.9
1787 Male, age 76, left hemisphere 61.2
2686 Male, age 75, right hemisphere 39.8
2117 Female, age 91, right hemisphere 21.1
Hippocampus, CA1
nTPM: 94.2
2749 Male, age 80, left hemisphere 154.8
2045 Male, age 76, both hemispheres 94.3
1873 Female, age 85, both hemispheres 81.6
2082 Female, age 91, right hemisphere 79.5
2527 Male, age 74, both hemispheres 60.8
Hippocampus, CA2
nTPM: 66.1
1892 Male, age 76, both hemispheres 110.8
1963 Male, age 80, left hemisphere 69.4
1940 Female, age 85, left hemisphere 57.9
2437 Female, age 94, left hemisphere 54.3
2249 Male, age 74, both hemispheres 53.0
2113 Female, age 91, right hemisphere 51.1
Hippocampus, CA3
nTPM: 93.1
2620 Female, age 94, left hemisphere 160.9
2137 Male, age 80, left hemisphere 128.7
2436 Male, age 74, both hemispheres 86.0
1867 Male, age 76, both hemispheres 80.4
2861 Female, age 67, both hemispheres 58.4
1891 Female, age 85, both hemispheres 44.0
Parahippocampal cortex
nTPM: 74.0
1850 Male, age 80, both hemispheres 108.9
2693 Female, age 94, both hemispheres 93.3
2245 Female, age 91, both hemispheres 92.1
2250 Female, age 67, right hemisphere 86.4
1933 Female, age 85, both hemispheres 74.6
1990 Female, age 91, right hemisphere 73.5
2532 Female, age 72, left hemisphere 69.7
2018 Male, age 76, both hemispheres 62.4
2622 Female, age 67, right hemisphere 54.0
2692 Male, age 74, both hemispheres 25.4
Perirhinal gyrus
nTPM: 122.6
1847 Female, age 91, left hemisphere 155.8
2521 Female, age 94, right hemisphere 139.1
1794 Male, age 80, right hemisphere 124.7
1841 Female, age 85, right hemisphere 115.3
2848 Male, age 76, right hemisphere 78.2
Subiculum
nTPM: 49.0
1901 Male, age 80, both hemispheres 71.7
1977 Female, age 85, both hemispheres 67.2
2042 Male, age 76, both hemispheres 41.2
2438 Female, age 94, left hemisphere 39.0
2619 Male, age 74, both hemispheres 38.8
2729 Female, age 91, right hemisphere 36.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 113.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.5
Samples: 197

Max nTPM: 339.9
Min nTPM: 17.9
Std nTPM: 69.6
Median nTPM: 95.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 339.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 308.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 285.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 284.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 268.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 263.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 261.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 260.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 254.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 249.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 242.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.4
FF:10169-103B7 60 years, female 227.0
FF:10153-102I9 76 years, female 173.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 166.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 166.6
Samples: 4

Max nTPM: 194.9
Min nTPM: 129.3
Sample A Female 194.9
Sample B Female 193.6
Sample C Male 129.3
Sample D Male 148.7
Entorhinal cortex
nTPM: 153.8
Samples: 4

Max nTPM: 167.1
Min nTPM: 138.9
Sample A Female 167.1
Sample B Female 163.8
Sample C Male 145.2
Sample D Male 138.9
Subiculum
nTPM: 120.8
Samples: 4

Max nTPM: 142.9
Min nTPM: 106.0
Sample A Female 142.9
Sample B Female 106.0
Sample C Male 118.6
Sample D Male 115.7
Ventral hippocampus
nTPM: 144.9
Samples: 4

Max nTPM: 190.5
Min nTPM: 104.2
Sample A Female 137.3
Sample B Female 104.2
Sample C Male 147.4
Sample D Male 190.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 668.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 637.0
Samples: 4

Max nTPM: 710.4
Min nTPM: 583.6
Sample A Male 641.1
Sample B Male 710.4
Sample C Female 612.8
Sample D Female 583.6
Hippocampal formation
nTPM: 668.9
Samples: 4

Max nTPM: 698.3
Min nTPM: 619.0
Sample A Male 698.3
Sample B Male 673.3
Sample C Female 685.1
Sample D Female 619.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
74581026 Antisense, RP_060215_02_D07, Mouse strain C57BL/6J (56 days, male) 15.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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