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GATAD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.6 nTPM
HPA:9.6 nTPM
GTEx:14.2 nTPM
FANTOM5:61.9 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:98.4 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.6
Sample id Sample description nTPM
Hippocampus
nTPM: 8.9
1855 Male, age 76, left hemisphere 9.5
1911 Female, age 85, right hemisphere 9.4
2529 Female, age 94, left hemisphere 9.4
1898 Male, age 80, left hemisphere 8.4
2148 Female, age 91, left hemisphere 8.3
2621 Female, age 67, right hemisphere 8.2
Dentate gyrus
nTPM: 9.0
2010 Male, age 76, both hemispheres 9.6
2530 Female, age 94, left hemisphere 9.4
2246 Female, age 85, both hemispheres 9.2
2528 Male, age 74, both hemispheres 9.2
2531 Female, age 67, both hemispheres 8.2
1927 Female, age 91, both hemispheres 8.1
Entorhinal gyrus
nTPM: 8.9
2117 Female, age 91, right hemisphere 9.5
2764 Male, age 80, right hemisphere 9.3
2686 Male, age 75, right hemisphere 8.9
1787 Male, age 76, left hemisphere 8.6
2613 Female, age 94, left hemisphere 8.6
1938 Female, age 85, left hemisphere 8.2
Hippocampus, CA1
nTPM: 8.7
2082 Female, age 91, right hemisphere 9.2
2045 Male, age 76, both hemispheres 9.1
1873 Female, age 85, both hemispheres 8.8
2527 Male, age 74, both hemispheres 8.8
2749 Male, age 80, left hemisphere 7.5
Hippocampus, CA2
nTPM: 9.2
2113 Female, age 91, right hemisphere 9.7
2249 Male, age 74, both hemispheres 9.6
1940 Female, age 85, left hemisphere 9.2
2437 Female, age 94, left hemisphere 9.2
1963 Male, age 80, left hemisphere 9.1
1892 Male, age 76, both hemispheres 8.2
Hippocampus, CA3
nTPM: 8.4
1891 Female, age 85, both hemispheres 10.0
2436 Male, age 74, both hemispheres 8.6
1867 Male, age 76, both hemispheres 8.1
2620 Female, age 94, left hemisphere 8.1
2861 Female, age 67, both hemispheres 8.0
2137 Male, age 80, left hemisphere 7.7
Parahippocampal cortex
nTPM: 9.0
2018 Male, age 76, both hemispheres 10.2
2692 Male, age 74, both hemispheres 10.1
2532 Female, age 72, left hemisphere 9.4
1990 Female, age 91, right hemisphere 9.2
2693 Female, age 94, both hemispheres 8.9
2250 Female, age 67, right hemisphere 8.7
1933 Female, age 85, both hemispheres 8.6
1850 Male, age 80, both hemispheres 8.5
2622 Female, age 67, right hemisphere 8.2
2245 Female, age 91, both hemispheres 7.8
Perirhinal gyrus
nTPM: 8.3
1841 Female, age 85, right hemisphere 8.8
2848 Male, age 76, right hemisphere 8.7
2521 Female, age 94, right hemisphere 8.5
1794 Male, age 80, right hemisphere 8.0
1847 Female, age 91, left hemisphere 7.5
Subiculum
nTPM: 9.6
2042 Male, age 76, both hemispheres 11.0
1977 Female, age 85, both hemispheres 9.6
2619 Male, age 74, both hemispheres 9.6
2729 Female, age 91, right hemisphere 9.4
2438 Female, age 94, left hemisphere 9.1
1901 Male, age 80, both hemispheres 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.2
Samples: 197

Max nTPM: 29.8
Min nTPM: 7.9
Std nTPM: 3.6
Median nTPM: 13.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 28.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 26.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 25.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 22.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 21.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 21.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 20.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 19.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.9
FF:10153-102I9 76 years, female 68.4
FF:10169-103B7 60 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.5
Sample A Female 15.4
Sample B Female 12.6
Sample C Male 13.2
Sample D Male 10.5
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.1
Sample A Female 14.1
Sample B Female 13.4
Sample C Male 12.2
Sample D Male 9.1
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.7
Sample A Female 15.2
Sample B Female 12.4
Sample C Male 12.1
Sample D Male 10.7
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.9
Sample A Female 13.8
Sample B Female 9.9
Sample C Male 11.8
Sample D Male 11.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.4
Samples: 4

Max nTPM: 100.6
Min nTPM: 94.2
Sample A Male 100.0
Sample B Male 98.9
Sample C Female 100.6
Sample D Female 94.2
Hippocampal formation
nTPM: 92.2
Samples: 4

Max nTPM: 109.7
Min nTPM: 83.2
Sample A Male 109.7
Sample B Male 90.5
Sample C Female 85.3
Sample D Female 83.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70546311 Antisense, RP_050623_04_A05, Mouse strain C57BL/6J (56 days, male) 2.1

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