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DHRS4
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.6 nTPM
HPA:8.6 nTPM
GTEx:21.0 nTPM
FANTOM5:40.3 Scaled Tags Per Million

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 8.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 8.0
2019 Male, age 18, unknown 8.9
2411 Female, age 72, unknown 8.5
2828 Female, age 72, unknown 8.5
1827 Male, age 72, unknown 8.1
1833 Male, age 53, unknown 8.1
1830 Male, age 51, unknown 7.9
1870 Female, age 42, unknown 7.9
2666 Male, age 74, left hemisphere 7.6
2586 Male, age 75, left hemisphere 7.5
2219 Male, age 76, both hemispheres 7.4
Dorsal raphe nucleus
nTPM: 8.1
2298 Female, age 72, unknown 8.5
2750 Male, age 76, both hemispheres 8.2
1828 Male, age 53, unknown 8.0
2016 Female, age 72, unknown 8.0
2047 Male, age 72, unknown 7.8
Inferior colliculus
nTPM: 7.6
1890 Male, age 53, unknown 7.9
2097 Female, age 72, unknown 7.8
1848 Female, age 42, unknown 7.3
2849 Male, age 72, unknown 7.3
Median raphe nucleus
nTPM: 8.0
2220 Male, age 76, midline 8.0
Pedunculopontine tegmental nucleus
nTPM: 8.1
2334 Male, age 80, both hemispheres 8.5
2338 Male, age 61, both hemispheres 8.0
1921 Female, age 85, both hemispheres 7.9
Periaquaductal grey, anterior
nTPM: 7.8
1947 Male, age 18, unknown 8.0
1795 Male, age 51, unknown 7.9
2502 Female, age 75, unknown 7.5
Periaquaductal grey, dorsal
nTPM: 7.7
1831 Male, age 72, unknown 8.3
2464 Female, age 72, unknown 7.9
2850 Male, age 76, both hemispheres 7.4
1840 Male, age 53, unknown 7.2
Periaquaductal grey, lateral
nTPM: 7.8
2272 Male, age 74, both hemispheres 8.3
2053 Male, age 18, unknown 7.8
2140 Male, age 76, both hemispheres 7.4
Pretectal area
nTPM: 8.4
1817 Female, age 42, unknown 9.5
2007 Male, age 72, unknown 9.1
1816 Male, age 51, unknown 8.7
1944 Female, age 72, unknown 8.7
1815 Male, age 53, unknown 8.6
2273 Male, age 74, both hemispheres 8.6
2667 Female, age 75, unknown 8.4
2224 Female, age 72, unknown 7.9
2316 Male, age 76, right hemisphere 7.8
2825 Male, age 18, unknown 7.8
2407 Male, age 75, both hemispheres 7.2
Red nucleus
nTPM: 8.6
1865 Male, age 51, unknown 9.4
1904 Male, age 53, unknown 9.1
2823 Male, age 76, right hemisphere 9.1
2785 Male, age 18, unknown 8.9
2503 Female, age 72, unknown 8.8
1821 Female, age 72, unknown 8.7
2725 Female, age 75, unknown 8.6
2588 Male, age 74, left hemisphere 8.4
1954 Female, age 42, unknown 8.3
2227 Male, age 72, unknown 8.3
2769 Male, age 72, unknown 8.2
2584 Male, age 75, left hemisphere 7.6
Substantia nigra
nTPM: 7.8
1889 Female, age 72, unknown 8.5
2665 Male, age 74, both hemispheres 8.3
2409 Female, age 72, unknown 8.1
2590 Female, age 75, unknown 8.1
2583 Male, age 75, right hemisphere 7.9
1851 Male, age 51, unknown 7.8
1916 Female, age 42, unknown 7.5
2699 Male, age 18, unknown 7.5
1941 Male, age 53, unknown 7.4
2241 Male, age 72, unknown 7.2
Superior colliculus
nTPM: 8.1
1913 Female, age 42, unknown 9.1
1995 Male, age 72, unknown 8.9
2087 Female, age 72, unknown 8.4
1796 Male, age 53, unknown 8.2
2587 Male, age 74, left hemisphere 8.2
2668 Female, age 75, unknown 8.0
1895 Male, age 76, right hemisphere 7.9
2261 Male, age 18, unknown 7.8
1839 Male, age 51, unknown 7.5
2664 Male, age 75, both hemispheres 7.3
Ventral tegmental area
nTPM: 8.0
2223 Female, age 72, unknown 8.4
2410 Female, age 72, unknown 8.4
2218 Male, age 76, both hemispheres 8.1
2021 Male, age 53, unknown 8.0
1942 Male, age 51, unknown 7.8
1915 Female, age 42, unknown 7.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 21.0
Samples: 139

Max nTPM: 37.1
Min nTPM: 7.0
Std nTPM: 5.6
Median nTPM: 20.9
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 37.1
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 33.6
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 32.7
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 32.1
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 32.0
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 31.9
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 31.7
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 31.0
GTEX-R55E-0011-R2A-SM-EYYV9 20-29 years, male 30.2
GTEX-1HR98-0011-R2a-SM-ARL7A 60-69 years, male 30.1
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 29.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 40.3
FF:10158-103A5 76 years, female 40.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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