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TSC22D3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:81.3 nTPM
HPA:81.3 nTPM
GTEx:80.6 nTPM
FANTOM5:112.6 Scaled Tags Per Million
Pig:90.1 nTPM
Mouse:65.7 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034364
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.3
Sample id Sample description nTPM
Hippocampus
nTPM: 79.1
2621 Female, age 67, right hemisphere 81.2
1898 Male, age 80, left hemisphere 80.6
2529 Female, age 94, left hemisphere 79.4
1911 Female, age 85, right hemisphere 78.6
2148 Female, age 91, left hemisphere 77.6
1855 Male, age 76, left hemisphere 77.4
Dentate gyrus
nTPM: 76.9
2010 Male, age 76, both hemispheres 81.6
2528 Male, age 74, both hemispheres 78.8
2246 Female, age 85, both hemispheres 77.7
2530 Female, age 94, left hemisphere 75.3
2531 Female, age 67, both hemispheres 74.1
1927 Female, age 91, both hemispheres 73.6
Entorhinal gyrus
nTPM: 79.8
2764 Male, age 80, right hemisphere 81.7
2686 Male, age 75, right hemisphere 80.9
1938 Female, age 85, left hemisphere 80.6
2117 Female, age 91, right hemisphere 80.5
1787 Male, age 76, left hemisphere 79.8
2613 Female, age 94, left hemisphere 75.6
Hippocampus, CA1
nTPM: 80.5
2082 Female, age 91, right hemisphere 83.3
2749 Male, age 80, left hemisphere 81.8
2527 Male, age 74, both hemispheres 79.8
1873 Female, age 85, both hemispheres 78.8
2045 Male, age 76, both hemispheres 78.7
Hippocampus, CA2
nTPM: 79.4
2113 Female, age 91, right hemisphere 84.7
1963 Male, age 80, left hemisphere 83.2
2437 Female, age 94, left hemisphere 82.1
2249 Male, age 74, both hemispheres 77.4
1892 Male, age 76, both hemispheres 75.3
1940 Female, age 85, left hemisphere 74.1
Hippocampus, CA3
nTPM: 77.8
2436 Male, age 74, both hemispheres 88.4
2861 Female, age 67, both hemispheres 81.6
1891 Female, age 85, both hemispheres 76.5
2137 Male, age 80, left hemisphere 76.2
1867 Male, age 76, both hemispheres 75.0
2620 Female, age 94, left hemisphere 68.8
Parahippocampal cortex
nTPM: 80.2
2622 Female, age 67, right hemisphere 90.4
2018 Male, age 76, both hemispheres 82.8
2245 Female, age 91, both hemispheres 81.1
1990 Female, age 91, right hemisphere 80.7
1933 Female, age 85, both hemispheres 80.2
1850 Male, age 80, both hemispheres 79.9
2692 Male, age 74, both hemispheres 79.9
2532 Female, age 72, left hemisphere 79.5
2250 Female, age 67, right hemisphere 73.8
2693 Female, age 94, both hemispheres 73.3
Perirhinal gyrus
nTPM: 78.9
1794 Male, age 80, right hemisphere 84.3
1841 Female, age 85, right hemisphere 81.7
1847 Female, age 91, left hemisphere 76.7
2848 Male, age 76, right hemisphere 76.3
2521 Female, age 94, right hemisphere 75.6
Subiculum
nTPM: 81.3
2619 Male, age 74, both hemispheres 87.5
2438 Female, age 94, left hemisphere 85.1
1901 Male, age 80, both hemispheres 81.0
2042 Male, age 76, both hemispheres 80.8
1977 Female, age 85, both hemispheres 77.7
2729 Female, age 91, right hemisphere 75.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.6
Samples: 197

Max nTPM: 223.3
Min nTPM: 42.9
Std nTPM: 29.8
Median nTPM: 72.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 223.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 206.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 197.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 188.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 170.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 168.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 146.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 143.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 140.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 137.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 136.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.6
FF:10153-102I9 76 years, female 135.2
FF:10169-103B7 60 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 90.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 118.1
Min nTPM: 55.8
Sample A Female 118.1
Sample B Female 94.2
Sample C Male 92.2
Sample D Male 55.8
Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 99.0
Min nTPM: 58.5
Sample A Female 59.5
Sample B Female 99.0
Sample C Male 68.2
Sample D Male 58.5
Subiculum
nTPM: 70.0
Samples: 4

Max nTPM: 82.2
Min nTPM: 57.6
Sample A Female 82.2
Sample B Female 76.9
Sample C Male 63.1
Sample D Male 57.6
Ventral hippocampus
nTPM: 84.3
Samples: 4

Max nTPM: 98.7
Min nTPM: 72.4
Sample A Female 80.8
Sample B Female 72.4
Sample C Male 98.7
Sample D Male 85.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 87.8
Min nTPM: 51.4
Sample A Male 51.6
Sample B Male 51.4
Sample C Female 87.8
Sample D Female 72.1
Hippocampal formation
nTPM: 59.0
Samples: 4

Max nTPM: 81.0
Min nTPM: 39.8
Sample A Male 45.1
Sample B Male 39.8
Sample C Female 70.1
Sample D Female 81.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71789724 Antisense, RP_050921_01_H04, Mouse strain C57BL/6J (56 days, male) 0.2
74581366 Antisense, RP_050921_01_H04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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