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VPS26C
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:11.3 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:11.4 nTPM
Mouse:26.2 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023288
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 14.0
2529 Female, age 94, left hemisphere 15.7
1898 Male, age 80, left hemisphere 13.9
2148 Female, age 91, left hemisphere 13.9
1855 Male, age 76, left hemisphere 13.8
1911 Female, age 85, right hemisphere 13.7
2621 Female, age 67, right hemisphere 13.4
Dentate gyrus
nTPM: 13.8
2528 Male, age 74, both hemispheres 14.9
2010 Male, age 76, both hemispheres 14.7
2530 Female, age 94, left hemisphere 14.5
2246 Female, age 85, both hemispheres 13.2
1927 Female, age 91, both hemispheres 13.1
2531 Female, age 67, both hemispheres 12.4
Entorhinal gyrus
nTPM: 13.8
2117 Female, age 91, right hemisphere 15.2
1787 Male, age 76, left hemisphere 14.3
1938 Female, age 85, left hemisphere 13.8
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.2
2686 Male, age 75, right hemisphere 12.3
Hippocampus, CA1
nTPM: 14.2
2749 Male, age 80, left hemisphere 15.5
2527 Male, age 74, both hemispheres 14.9
2045 Male, age 76, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.5
1873 Female, age 85, both hemispheres 13.3
Hippocampus, CA2
nTPM: 14.4
2249 Male, age 74, both hemispheres 15.0
2437 Female, age 94, left hemisphere 15.0
1892 Male, age 76, both hemispheres 14.4
1940 Female, age 85, left hemisphere 14.3
1963 Male, age 80, left hemisphere 13.9
2113 Female, age 91, right hemisphere 13.7
Hippocampus, CA3
nTPM: 14.0
2436 Male, age 74, both hemispheres 15.1
1867 Male, age 76, both hemispheres 14.5
2137 Male, age 80, left hemisphere 14.4
1891 Female, age 85, both hemispheres 13.8
2861 Female, age 67, both hemispheres 13.6
2620 Female, age 94, left hemisphere 12.5
Parahippocampal cortex
nTPM: 13.6
2018 Male, age 76, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.0
2250 Female, age 67, right hemisphere 14.0
1850 Male, age 80, both hemispheres 13.9
2532 Female, age 72, left hemisphere 13.7
2245 Female, age 91, both hemispheres 13.6
2622 Female, age 67, right hemisphere 13.0
2692 Male, age 74, both hemispheres 13.0
1933 Female, age 85, both hemispheres 12.9
2693 Female, age 94, both hemispheres 12.9
Perirhinal gyrus
nTPM: 13.9
1794 Male, age 80, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.5
1847 Female, age 91, left hemisphere 13.8
2521 Female, age 94, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.7
Subiculum
nTPM: 14.3
1901 Male, age 80, both hemispheres 14.9
2619 Male, age 74, both hemispheres 14.9
1977 Female, age 85, both hemispheres 14.8
2729 Female, age 91, right hemisphere 14.1
2042 Male, age 76, both hemispheres 13.7
2438 Female, age 94, left hemisphere 13.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.3
Samples: 197

Max nTPM: 20.6
Min nTPM: 7.7
Std nTPM: 1.8
Median nTPM: 11.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 20.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 19.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 18.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 15.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 15.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 15.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 14.5
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 14.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10153-102I9 76 years, female 33.3
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.0
Sample A Female 13.2
Sample B Female 11.9
Sample C Male 10.5
Sample D Male 10.0
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.6
Sample A Female 10.0
Sample B Female 9.7
Sample C Male 10.2
Sample D Male 9.6
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.8
Sample A Female 12.2
Sample B Female 10.6
Sample C Male 10.0
Sample D Male 9.8
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.8
Sample A Female 11.2
Sample B Female 9.8
Sample C Male 12.2
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 28.8
Min nTPM: 23.2
Sample A Male 25.7
Sample B Male 28.8
Sample C Female 26.1
Sample D Female 23.2
Hippocampal formation
nTPM: 26.2
Samples: 4

Max nTPM: 30.8
Min nTPM: 24.1
Sample A Male 30.8
Sample B Male 25.0
Sample C Female 24.1
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
413830 Antisense, RP_040809_01_H09, Mouse strain C57BL/6J (56 days, male) 12.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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