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CABP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:151.5 nTPM
HPA:151.5 nTPM
GTEx:143.6 nTPM
FANTOM5:30.7 Scaled Tags Per Million
Pig:146.8 nTPM
Mouse:119.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051438
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 151.5
Sample id Sample description nTPM
Hippocampus
nTPM: 116.3
1911 Female, age 85, right hemisphere 128.3
1898 Male, age 80, left hemisphere 126.0
2621 Female, age 67, right hemisphere 117.6
2529 Female, age 94, left hemisphere 116.2
1855 Male, age 76, left hemisphere 106.1
2148 Female, age 91, left hemisphere 103.7
Dentate gyrus
nTPM: 110.0
2530 Female, age 94, left hemisphere 123.8
1927 Female, age 91, both hemispheres 123.0
2010 Male, age 76, both hemispheres 108.8
2246 Female, age 85, both hemispheres 102.8
2531 Female, age 67, both hemispheres 101.1
2528 Male, age 74, both hemispheres 100.3
Entorhinal gyrus
nTPM: 139.4
2764 Male, age 80, right hemisphere 175.3
2613 Female, age 94, left hemisphere 171.1
2686 Male, age 75, right hemisphere 157.8
1787 Male, age 76, left hemisphere 118.9
1938 Female, age 85, left hemisphere 114.4
2117 Female, age 91, right hemisphere 98.8
Hippocampus, CA1
nTPM: 124.1
2749 Male, age 80, left hemisphere 179.9
2527 Male, age 74, both hemispheres 126.5
2082 Female, age 91, right hemisphere 110.5
1873 Female, age 85, both hemispheres 106.4
2045 Male, age 76, both hemispheres 97.1
Hippocampus, CA2
nTPM: 129.9
2437 Female, age 94, left hemisphere 141.4
1892 Male, age 76, both hemispheres 134.1
1963 Male, age 80, left hemisphere 130.5
2249 Male, age 74, both hemispheres 128.3
1940 Female, age 85, left hemisphere 127.8
2113 Female, age 91, right hemisphere 117.3
Hippocampus, CA3
nTPM: 121.4
2137 Male, age 80, left hemisphere 182.2
1867 Male, age 76, both hemispheres 125.3
2436 Male, age 74, both hemispheres 111.2
2861 Female, age 67, both hemispheres 108.3
1891 Female, age 85, both hemispheres 102.3
2620 Female, age 94, left hemisphere 98.8
Parahippocampal cortex
nTPM: 150.5
2622 Female, age 67, right hemisphere 208.6
2532 Female, age 72, left hemisphere 176.4
1850 Male, age 80, both hemispheres 165.1
2245 Female, age 91, both hemispheres 158.5
2693 Female, age 94, both hemispheres 150.9
1933 Female, age 85, both hemispheres 135.0
1990 Female, age 91, right hemisphere 133.0
2018 Male, age 76, both hemispheres 131.2
2692 Male, age 74, both hemispheres 128.3
2250 Female, age 67, right hemisphere 117.5
Perirhinal gyrus
nTPM: 151.5
1794 Male, age 80, right hemisphere 175.3
1841 Female, age 85, right hemisphere 162.3
2848 Male, age 76, right hemisphere 148.0
1847 Female, age 91, left hemisphere 135.9
2521 Female, age 94, right hemisphere 135.8
Subiculum
nTPM: 119.7
1901 Male, age 80, both hemispheres 145.9
2438 Female, age 94, left hemisphere 131.7
2042 Male, age 76, both hemispheres 118.7
2619 Male, age 74, both hemispheres 117.1
1977 Female, age 85, both hemispheres 107.5
2729 Female, age 91, right hemisphere 97.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 143.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 143.6
Samples: 197

Max nTPM: 480.9
Min nTPM: 6.4
Std nTPM: 108.3
Median nTPM: 123.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 480.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 472.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 462.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 454.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 451.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 420.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 408.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 406.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 393.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 393.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 380.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.7
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 21.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 146.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 87.7
Samples: 4

Max nTPM: 118.8
Min nTPM: 59.7
Sample A Female 118.8
Sample B Female 96.4
Sample C Male 59.7
Sample D Male 76.0
Entorhinal cortex
nTPM: 146.9
Samples: 4

Max nTPM: 191.9
Min nTPM: 120.6
Sample A Female 147.7
Sample B Female 191.9
Sample C Male 127.2
Sample D Male 120.6
Subiculum
nTPM: 64.4
Samples: 4

Max nTPM: 77.3
Min nTPM: 56.8
Sample A Female 77.3
Sample B Female 57.8
Sample C Male 56.8
Sample D Male 65.7
Ventral hippocampus
nTPM: 81.9
Samples: 4

Max nTPM: 96.4
Min nTPM: 58.3
Sample A Female 96.4
Sample B Female 58.3
Sample C Male 88.1
Sample D Male 84.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.9
Samples: 4

Max nTPM: 165.4
Min nTPM: 82.1
Sample A Male 142.8
Sample B Male 165.4
Sample C Female 89.3
Sample D Female 82.1
Hippocampal formation
nTPM: 95.7
Samples: 4

Max nTPM: 110.3
Min nTPM: 86.3
Sample A Male 86.3
Sample B Male 94.7
Sample C Female 110.3
Sample D Female 91.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74514333 Antisense, RP_060208_02_C12, Mouse strain C57BL/6J (56 days, male) 0.3

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