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WIPI2
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:35.7 nTPM
FANTOM5:69.8 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:49.5 nTPM
Allen mouse:4.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Amygdala
nTPM: 36.9
2695 Female, age 67, right hemisphere 37.9
2814 Male, age 76, right hemisphere 37.1
2517 Female, age 94, left hemisphere 36.9
2514 Male, age 75, right hemisphere 36.3
1987 Female, age 91, left hemisphere 36.2
Basal amygdala
nTPM: 36.8
2609 Male, age 75, right hemisphere 40.5
2110 Male, age 80, left hemisphere 37.7
2243 Female, age 91, right hemisphere 37.5
1955 Male, age 76, both hemispheres 37.4
2685 Female, age 94, left hemisphere 36.3
2827 Female, age 67, right hemisphere 31.4
Central amygdala
nTPM: 36.8
1905 Male, age 76, both hemispheres 38.0
2515 Male, age 75, right hemisphere 37.8
2826 Female, age 94, left hemisphere 37.6
2239 Male, age 80, left hemisphere 37.4
2701 Female, age 91, right hemisphere 33.3
Corticomedial amygdala
nTPM: 36.1
2829 Male, age 80, left hemisphere 39.4
2428 Male, age 75, right hemisphere 38.7
2429 Female, age 94, left hemisphere 36.0
2242 Female, age 91, right hemisphere 35.3
2535 Female, age 67, right hemisphere 33.9
2240 Male, age 76, both hemispheres 33.3
Lateral amygdala
nTPM: 37.2
2534 Female, age 94, left hemisphere 40.0
2516 Male, age 75, right hemisphere 39.6
1883 Male, age 76, both hemispheres 39.5
2256 Male, age 80, left hemisphere 36.4
2255 Female, age 91, right hemisphere 34.7
2830 Female, age 67, right hemisphere 32.9
Stria terminalis, bed nucleus
nTPM: 38.8
1974 Female, age 91, both hemispheres 42.8
2486 Female, age 94, both hemispheres 39.2
2201 Male, age 74, unknown 34.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 35.7
Samples: 152

Max nTPM: 55.6
Min nTPM: 21.0
Std nTPM: 6.4
Median nTPM: 34.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 55.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 51.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 51.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 51.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 51.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 50.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 49.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 48.6
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 48.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 46.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 45.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 69.8
FF:10151-102I7 76 years, female 69.8

AMYGDALA - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Amygdala
nTPM: 27.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 24.6
Sample A Female 34.6
Sample B Female 24.9
Sample C Male 24.6
Sample D Male 26.6

AMYGDALA - Mouse RNA-seqi
Average nTPM 49.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 49.5
Samples: 4

Max nTPM: 51.6
Min nTPM: 46.3
Sample A Male 51.6
Sample B Male 49.0
Sample C Female 51.1
Sample D Female 46.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.4
68845436 Antisense, RP_050224_01_G07, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.