Brain tissue expression of AGAP1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	54.7	nTPM
GTEx:	54.7	nTPM
FANTOM5:	57.9	Scaled Tags Per Million

Pig:	45.3	nTPM
Mouse:	49.5	nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqⁱ

Average nTPM	54.7

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 54.7

Samples: 105

Max nTPM: 107.0
Min nTPM: 19.1
Std nTPM: 15.0
Median nTPM: 0.0

218_1	71 years, female	107.0
352_1	62 years, male	93.1
172_1	72 years, female	88.8
350_1	84 years, female	84.4
237_1	82 years, male	84.0
347_1	72 years, male	83.3
355_1	70 years, female	77.3
405_1	91 years, male	76.7
177_1	74 years, male	75.4
386_1	76 years, male	75.0
163_1	78 years, male	74.3
321_1	62 years, female	73.4
353_1	82 years, female	72.8
349_1	83 years, male	72.5
375_1	74 years, female	71.4
425_1	59 years, female	70.1
447_1	81 years, male	68.8
322_1	76 years, male	67.6
319_1	81 years, male	67.4
173_1	67 years, male	66.5
243_1	75 years, male	66.4
320_1	89 years, female	65.6
335_1	73 years, female	65.0
318_1	68 years, male	64.9
292_1	71 years, male	64.8
316_1	62 years, male	64.1
379_1	60 years, male	64.0
351_1	91 years, male	63.7
317_1	60 years, male	62.5
99_1	64 years, male	62.2
251_1	78 years, male	62.1
291_1	76 years, male	61.1
354_1	81 years, female	59.8
406_1	79 years, male	59.8
348_1	84 years, male	59.7
526_1	61 years, male	59.4
506_1	65 years, male	59.3
295_1	61 years, female	59.1
35_1	74 years, female	59.0
229_1	69 years, female	58.9
6_1	73 years, female	58.3
384_1	83 years, male	57.6
517_1	88 years, male	57.3
518_1	75 years, female	57.2
389_1	86 years, female	57.1
286_1	68 years, female	56.9
376_1	75 years, female	56.1
377_1	82 years, female	55.9
503_1	68 years, male	55.1
293_1	68 years, female	54.0
356_1	87 years, female	53.9
452_1	88 years, female	53.5
396_1	62 years, male	53.4
324_1	76 years, male	53.2
468_1	89 years, male	52.9
18_1	88 years, male	52.7
189_1	76 years, male	52.7
264_1	73 years, female	52.4
311_1	78 years, male	52.0
117_1	61 years, male	51.9
217_1	76 years, male	51.9
394_1	75 years, female	51.0
307_1	66 years, female	49.2
246_1	77 years, male	49.1
480_1	63 years, male	49.0
137_1	83 years, male	48.6
42_1	85 years, male	48.5
145_1	84 years, male	46.8
266_1	85 years, male	46.7
9_1	66 years, female	46.2
32_1	67 years, male	46.1
254_1	77 years, female	45.7
404_1	82 years, female	45.6
314_1	67 years, male	45.5
265_1	87 years, male	44.6
81_1	67 years, male	44.4
43_1	64 years, female	43.6
142_1	61 years, female	43.0
288_1	66 years, female	43.0
17_1	71 years, male	42.9
313_1	79 years, female	42.7
115_1	83 years, male	42.5
41_1	94 years, female	41.8
490_1	67 years, female	41.7
139_1	64 years, female	41.5
499_1	55 years, female	41.1
415_1	77 years, female	40.6
4_1	88 years, female	40.1
153_1	70 years, female	40.0
109_1	81 years, female	39.8
120_1	70 years, female	39.5
466_1	57 years, female	38.6
126_1	63 years, male	38.2
162_1	79 years, female	37.4
315_1	62 years, female	36.5
501_1	88 years, male	36.5
2_1	77 years, female	35.5
119_1	70 years, female	35.5
495_1	57 years, female	35.3
414_1	84 years, female	34.8
413_1	59 years, female	34.5
149_1	88 years, male	30.5
491_1	89 years, female	30.0
89_1	63 years, male	29.5
308_1	70 years, female	19.1
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	57.9

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 57.9

FF:10030-101E3

24-65 years, mixed

57.9

RETINA - Pig RNA-seqⁱ

Average nTPM	45.3

Pig sample

Sample description

nTPM

Retina
nTPM: 45.4

Samples: 4

Max nTPM: 48.3
Min nTPM: 42.1

Sample A	Female	48.3
Sample B	Female	43.7
Sample C	Male	47.3
Sample D	Male	42.1

RETINA - Mouse RNA-seqⁱ

Average nTPM	49.5

Mouse sample

Sample description

nTPM

Retina
nTPM: 49.5

Samples: 4

Max nTPM: 59.9
Min nTPM: 36.2

Sample A	Male	59.9
Sample B	Male	50.7
Sample C	Female	36.2
Sample D	Female	51.2