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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:22.3 nTPM
FANTOM5:70.5 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:8.9 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045288Antibody CAB022632
Glial cells Not detectedLow
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
2529 Female, age 94, left hemisphere 33.9
1855 Male, age 76, left hemisphere 31.9
1911 Female, age 85, right hemisphere 31.8
2621 Female, age 67, right hemisphere 29.9
2148 Female, age 91, left hemisphere 29.2
1898 Male, age 80, left hemisphere 29.0
Dentate gyrus
nTPM: 30.2
2530 Female, age 94, left hemisphere 35.2
2010 Male, age 76, both hemispheres 34.7
2528 Male, age 74, both hemispheres 31.7
2246 Female, age 85, both hemispheres 29.7
2531 Female, age 67, both hemispheres 26.6
1927 Female, age 91, both hemispheres 23.1
Entorhinal gyrus
nTPM: 30.4
2117 Female, age 91, right hemisphere 37.1
2686 Male, age 75, right hemisphere 32.7
1787 Male, age 76, left hemisphere 30.7
2764 Male, age 80, right hemisphere 28.3
1938 Female, age 85, left hemisphere 27.3
2613 Female, age 94, left hemisphere 26.3
Hippocampus, CA1
nTPM: 27.9
2082 Female, age 91, right hemisphere 32.0
2527 Male, age 74, both hemispheres 30.1
1873 Female, age 85, both hemispheres 27.7
2045 Male, age 76, both hemispheres 27.4
2749 Male, age 80, left hemisphere 22.2
Hippocampus, CA2
nTPM: 30.1
1940 Female, age 85, left hemisphere 34.2
2113 Female, age 91, right hemisphere 32.6
2437 Female, age 94, left hemisphere 30.5
1963 Male, age 80, left hemisphere 30.4
2249 Male, age 74, both hemispheres 28.6
1892 Male, age 76, both hemispheres 24.4
Hippocampus, CA3
nTPM: 27.8
1891 Female, age 85, both hemispheres 31.8
2861 Female, age 67, both hemispheres 30.5
1867 Male, age 76, both hemispheres 30.4
2436 Male, age 74, both hemispheres 26.8
2620 Female, age 94, left hemisphere 24.3
2137 Male, age 80, left hemisphere 23.4
Parahippocampal cortex
nTPM: 28.3
2018 Male, age 76, both hemispheres 36.4
2692 Male, age 74, both hemispheres 33.8
2532 Female, age 72, left hemisphere 28.9
2622 Female, age 67, right hemisphere 27.8
1990 Female, age 91, right hemisphere 27.4
2245 Female, age 91, both hemispheres 27.4
2250 Female, age 67, right hemisphere 26.4
1850 Male, age 80, both hemispheres 25.6
1933 Female, age 85, both hemispheres 25.3
2693 Female, age 94, both hemispheres 24.4
Perirhinal gyrus
nTPM: 23.9
2521 Female, age 94, right hemisphere 25.7
2848 Male, age 76, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.8
1841 Female, age 85, right hemisphere 23.0
1847 Female, age 91, left hemisphere 22.8
Subiculum
nTPM: 33.4
2042 Male, age 76, both hemispheres 40.9
2619 Male, age 74, both hemispheres 34.1
2729 Female, age 91, right hemisphere 33.5
1901 Male, age 80, both hemispheres 31.6
2438 Female, age 94, left hemisphere 31.3
1977 Female, age 85, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 49.0
Min nTPM: 9.0
Std nTPM: 8.0
Median nTPM: 20.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 49.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 44.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 44.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 43.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 41.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 39.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 39.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 39.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.5
FF:10153-102I9 76 years, female 95.0
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.0
Samples: 4

Max nTPM: 55.0
Min nTPM: 23.7
Sample A Female 47.2
Sample B Female 38.2
Sample C Male 55.0
Sample D Male 23.7
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 28.4
Min nTPM: 24.2
Sample A Female 28.4
Sample B Female 28.2
Sample C Male 27.5
Sample D Male 24.2
Subiculum
nTPM: 33.5
Samples: 4

Max nTPM: 36.4
Min nTPM: 30.4
Sample A Female 33.9
Sample B Female 36.4
Sample C Male 30.4
Sample D Male 33.2
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 45.6
Min nTPM: 31.9
Sample A Female 36.3
Sample B Female 31.9
Sample C Male 45.6
Sample D Male 41.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 10.1
Min nTPM: 6.7
Sample A Male 9.3
Sample B Male 6.7
Sample C Female 10.1
Sample D Female 9.4
Hippocampal formation
nTPM: 8.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.5
Sample A Male 7.9
Sample B Male 7.5
Sample C Female 9.6
Sample D Female 7.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70194958 Antisense, RP_050517_02_B02, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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