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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:12.6 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:7.6 nTPM
Mouse:7.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036162Antibody HPA036163
Glial cells Not detectedNot detected
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1855 Male, age 76, left hemisphere 12.2
1898 Male, age 80, left hemisphere 12.1
1911 Female, age 85, right hemisphere 12.1
2529 Female, age 94, left hemisphere 11.8
2621 Female, age 67, right hemisphere 11.8
2148 Female, age 91, left hemisphere 11.0
Dentate gyrus
nTPM: 11.6
2246 Female, age 85, both hemispheres 12.1
2010 Male, age 76, both hemispheres 11.8
2531 Female, age 67, both hemispheres 11.8
1927 Female, age 91, both hemispheres 11.6
2530 Female, age 94, left hemisphere 11.6
2528 Male, age 74, both hemispheres 10.9
Entorhinal gyrus
nTPM: 11.7
2117 Female, age 91, right hemisphere 12.4
1787 Male, age 76, left hemisphere 12.0
1938 Female, age 85, left hemisphere 11.8
2686 Male, age 75, right hemisphere 11.8
2764 Male, age 80, right hemisphere 11.6
2613 Female, age 94, left hemisphere 10.7
Hippocampus, CA1
nTPM: 11.8
1873 Female, age 85, both hemispheres 12.1
2045 Male, age 76, both hemispheres 12.1
2527 Male, age 74, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.3
2749 Male, age 80, left hemisphere 11.3
Hippocampus, CA2
nTPM: 11.7
2437 Female, age 94, left hemisphere 12.4
1892 Male, age 76, both hemispheres 12.3
1963 Male, age 80, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.5
2113 Female, age 91, right hemisphere 11.0
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 11.8
1891 Female, age 85, both hemispheres 12.4
1867 Male, age 76, both hemispheres 12.2
2620 Female, age 94, left hemisphere 12.0
2436 Male, age 74, both hemispheres 11.7
2137 Male, age 80, left hemisphere 11.3
2861 Female, age 67, both hemispheres 11.1
Parahippocampal cortex
nTPM: 11.8
2018 Male, age 76, both hemispheres 12.4
1850 Male, age 80, both hemispheres 12.2
2693 Female, age 94, both hemispheres 12.1
2245 Female, age 91, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.7
1933 Female, age 85, both hemispheres 11.6
2692 Male, age 74, both hemispheres 11.6
1990 Female, age 91, right hemisphere 11.5
2532 Female, age 72, left hemisphere 11.5
2622 Female, age 67, right hemisphere 11.5
Perirhinal gyrus
nTPM: 11.6
2848 Male, age 76, right hemisphere 11.9
1841 Female, age 85, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.6
1847 Female, age 91, left hemisphere 11.5
1794 Male, age 80, right hemisphere 11.2
Subiculum
nTPM: 11.9
1901 Male, age 80, both hemispheres 12.3
2042 Male, age 76, both hemispheres 12.0
2619 Male, age 74, both hemispheres 12.0
1977 Female, age 85, both hemispheres 11.9
2438 Female, age 94, left hemisphere 11.8
2729 Female, age 91, right hemisphere 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 24.0
Min nTPM: 5.8
Std nTPM: 2.8
Median nTPM: 12.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 24.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 23.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 19.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 19.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 18.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 18.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 18.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 17.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 17.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 17.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.2
FF:10153-102I9 76 years, female 53.5
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 7.9
Sample C Male 6.3
Sample D Male 10.3
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.2
Sample A Female 6.5
Sample B Female 7.0
Sample C Male 7.6
Sample D Male 6.2
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 8.7
Sample C Male 7.4
Sample D Male 7.4
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.9
Sample A Female 7.8
Sample B Female 8.8
Sample C Male 5.9
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.9
Sample A Male 6.8
Sample B Male 7.2
Sample C Female 7.2
Sample D Female 5.9
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 4.3
Sample A Male 9.4
Sample B Male 8.8
Sample C Female 4.3
Sample D Female 7.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70445419 Antisense, RP_050614_03_G04, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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