ABOUTMENU
HELP
NEWS
EIF5B
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.5 nTPM
HPA:52.5 nTPM
GTEx:64.5 nTPM
FANTOM5:123.2 Scaled Tags Per Million
Pig:16.8 nTPM
Mouse:14.4 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 52.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 50.4
2666 Male, age 74, left hemisphere 53.2
1870 Female, age 42, unknown 51.2
2219 Male, age 76, both hemispheres 51.1
1833 Male, age 53, unknown 50.9
1830 Male, age 51, unknown 50.7
1827 Male, age 72, unknown 50.3
2828 Female, age 72, unknown 49.7
2586 Male, age 75, left hemisphere 49.2
2019 Male, age 18, unknown 49.0
2411 Female, age 72, unknown 48.7
Dorsal raphe nucleus
nTPM: 48.2
2016 Female, age 72, unknown 50.2
1828 Male, age 53, unknown 49.4
2750 Male, age 76, both hemispheres 48.6
2047 Male, age 72, unknown 47.3
2298 Female, age 72, unknown 45.4
Inferior colliculus
nTPM: 49.7
2849 Male, age 72, unknown 53.1
1848 Female, age 42, unknown 49.5
1890 Male, age 53, unknown 49.4
2097 Female, age 72, unknown 46.8
Median raphe nucleus
nTPM: 51.0
2220 Male, age 76, midline 51.0
Pedunculopontine tegmental nucleus
nTPM: 50.6
2338 Male, age 61, both hemispheres 52.1
2334 Male, age 80, both hemispheres 51.8
1921 Female, age 85, both hemispheres 47.9
Periaquaductal grey, anterior
nTPM: 48.7
2502 Female, age 75, unknown 49.6
1947 Male, age 18, unknown 48.8
1795 Male, age 51, unknown 47.8
Periaquaductal grey, dorsal
nTPM: 51.6
2850 Male, age 76, both hemispheres 54.4
1831 Male, age 72, unknown 51.9
2464 Female, age 72, unknown 50.4
1840 Male, age 53, unknown 49.5
Periaquaductal grey, lateral
nTPM: 48.8
2053 Male, age 18, unknown 50.1
2140 Male, age 76, both hemispheres 49.6
2272 Male, age 74, both hemispheres 46.6
Pretectal area
nTPM: 49.4
1815 Male, age 53, unknown 51.3
2407 Male, age 75, both hemispheres 51.1
2825 Male, age 18, unknown 50.5
1817 Female, age 42, unknown 50.2
1816 Male, age 51, unknown 49.5
2007 Male, age 72, unknown 49.2
1944 Female, age 72, unknown 48.9
2224 Female, age 72, unknown 48.8
2316 Male, age 76, right hemisphere 48.3
2273 Male, age 74, both hemispheres 48.2
2667 Female, age 75, unknown 47.4
Red nucleus
nTPM: 52.5
2503 Female, age 72, unknown 56.9
2725 Female, age 75, unknown 56.3
2588 Male, age 74, left hemisphere 54.3
1865 Male, age 51, unknown 53.4
1954 Female, age 42, unknown 53.1
1904 Male, age 53, unknown 51.9
1821 Female, age 72, unknown 51.8
2823 Male, age 76, right hemisphere 51.8
2227 Male, age 72, unknown 51.3
2769 Male, age 72, unknown 50.5
2584 Male, age 75, left hemisphere 50.1
2785 Male, age 18, unknown 48.7
Substantia nigra
nTPM: 49.3
2699 Male, age 18, unknown 54.6
2665 Male, age 74, both hemispheres 50.3
1941 Male, age 53, unknown 49.0
2409 Female, age 72, unknown 49.0
1916 Female, age 42, unknown 48.9
1889 Female, age 72, unknown 48.8
2583 Male, age 75, right hemisphere 48.6
1851 Male, age 51, unknown 48.5
2590 Female, age 75, unknown 48.5
2241 Male, age 72, unknown 47.0
Superior colliculus
nTPM: 49.7
1995 Male, age 72, unknown 52.4
2587 Male, age 74, left hemisphere 52.2
1913 Female, age 42, unknown 51.8
1839 Male, age 51, unknown 50.6
2664 Male, age 75, both hemispheres 49.2
1895 Male, age 76, right hemisphere 48.7
2668 Female, age 75, unknown 48.6
2087 Female, age 72, unknown 48.1
1796 Male, age 53, unknown 48.0
2261 Male, age 18, unknown 47.2
Ventral tegmental area
nTPM: 49.4
2223 Female, age 72, unknown 51.3
2021 Male, age 53, unknown 49.9
2218 Male, age 76, both hemispheres 49.8
1915 Female, age 42, unknown 48.8
1942 Male, age 51, unknown 48.8
2410 Female, age 72, unknown 47.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 64.5
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 64.5
Samples: 139

Max nTPM: 260.1
Min nTPM: 22.6
Std nTPM: 31.2
Median nTPM: 58.4
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 260.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 145.6
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 142.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 142.2
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 135.5
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 127.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 122.9
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 114.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 114.2
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 105.5
GTEX-1E1VI-0011-R2a-SM-9QEGS 50-59 years, male 103.3
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 123.2
FF:10158-103A5 76 years, female 123.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 16.8
Pig sample Sample description nTPM
Midbrain
nTPM: 16.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.6
Sample A Female 19.6
Sample B Female 15.6
Sample C Male 17.3
Sample D Male 14.6
Periaqueductal gray
nTPM: 14.0
Samples: 3

Max nTPM: 14.9
Min nTPM: 12.9
Sample B Female 12.9
Sample C Male 14.9
Sample D Male 14.2
Substantia nigra
nTPM: 15.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 15.2
Sample C Male 16.4
Sample D Male 16.0
Superior colliculi
nTPM: 15.5
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.3
Sample A Female 15.7
Sample B Female 13.3
Sample C Male 16.6
Sample D Male 16.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 14.4
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.0
Sample A Male 12.0
Sample B Male 14.0
Sample C Female 16.3
Sample D Female 15.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
71764101 Antisense, RP_050921_03_B12, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.