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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		101.361
RNA expressioni
Consensus:27.0 nTPM
HPA:27.0 nTPM
GTEx:21.5 nTPM
FANTOM5:137.9 Scaled Tags Per Million
Pig:47.9 nTPM
Mouse:92.5 nTPM
Allen mouse:7.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA061689
Amygdala mean intensity 101.361
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 101.361
Basal medial amygdaloid nucleus 84.861
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 58.462
Cortical amygdala 94.182
Central amygdala 61.048
Medial amygdaloid nucleus 100.668

AMYGDALA - HPA Brain RNA-seq
Max nTPM 27.0
Sample id Sample description nTPM
Amygdala
nTPM: 3.1
2814 Male, age 76, right hemisphere 12.9
1987 Female, age 91, left hemisphere 2.9
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 4.9
2243 Female, age 91, right hemisphere 10.7
1955 Male, age 76, both hemispheres 9.4
2685 Female, age 94, left hemisphere 5.5
2110 Male, age 80, left hemisphere 3.8
2609 Male, age 75, right hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 5.1
2239 Male, age 80, left hemisphere 11.2
1905 Male, age 76, both hemispheres 9.6
2701 Female, age 91, right hemisphere 4.9
2515 Male, age 75, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 10.7
2242 Female, age 91, right hemisphere 26.4
2535 Female, age 67, right hemisphere 14.1
2429 Female, age 94, left hemisphere 12.1
2240 Male, age 76, both hemispheres 7.4
2829 Male, age 80, left hemisphere 4.3
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 3.9
1883 Male, age 76, both hemispheres 12.1
2534 Female, age 94, left hemisphere 7.8
2255 Female, age 91, right hemisphere 3.1
2256 Male, age 80, left hemisphere 0.5
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 27.0
2486 Female, age 94, both hemispheres 38.9
1974 Female, age 91, both hemispheres 29.4
2201 Male, age 74, unknown 12.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 21.5
Samples: 152

Max nTPM: 57.4
Min nTPM: 1.7
Std nTPM: 11.0
Median nTPM: 18.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 57.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 54.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 53.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 49.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 46.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 45.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 44.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 42.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 40.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 38.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 37.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 137.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 137.9
FF:10151-102I7 76 years, female 137.9

AMYGDALA - Pig RNA-seqi
Average nTPM 47.9
Pig sample Sample description nTPM
Amygdala
nTPM: 47.9
Samples: 4

Max nTPM: 73.8
Min nTPM: 31.0
Sample A Female 73.8
Sample B Female 31.0
Sample C Male 35.6
Sample D Male 51.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 92.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 92.5
Samples: 4

Max nTPM: 105.6
Min nTPM: 84.6
Sample A Male 105.6
Sample B Male 90.2
Sample C Female 84.6
Sample D Female 89.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 7.7
69837160 Antisense, RP_050217_01_A11, Mouse strain C57BL/6J (56 days, male) 7.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.