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TMED4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:37.7 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:76.7 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014650
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.8
2148 Female, age 91, left hemisphere 39.9
2529 Female, age 94, left hemisphere 39.3
1855 Male, age 76, left hemisphere 39.0
1911 Female, age 85, right hemisphere 38.9
1898 Male, age 80, left hemisphere 38.5
2621 Female, age 67, right hemisphere 37.3
Dentate gyrus
nTPM: 40.9
2528 Male, age 74, both hemispheres 43.4
2010 Male, age 76, both hemispheres 42.5
2530 Female, age 94, left hemisphere 41.9
2246 Female, age 85, both hemispheres 40.6
2531 Female, age 67, both hemispheres 39.3
1927 Female, age 91, both hemispheres 37.9
Entorhinal gyrus
nTPM: 39.7
2117 Female, age 91, right hemisphere 42.0
2764 Male, age 80, right hemisphere 41.3
2613 Female, age 94, left hemisphere 40.4
1787 Male, age 76, left hemisphere 39.4
1938 Female, age 85, left hemisphere 37.9
2686 Male, age 75, right hemisphere 37.5
Hippocampus, CA1
nTPM: 40.8
2749 Male, age 80, left hemisphere 42.6
2045 Male, age 76, both hemispheres 41.8
2082 Female, age 91, right hemisphere 40.9
2527 Male, age 74, both hemispheres 39.7
1873 Female, age 85, both hemispheres 39.0
Hippocampus, CA2
nTPM: 40.2
2249 Male, age 74, both hemispheres 43.1
1963 Male, age 80, left hemisphere 40.8
2113 Female, age 91, right hemisphere 40.2
1940 Female, age 85, left hemisphere 39.9
1892 Male, age 76, both hemispheres 39.7
2437 Female, age 94, left hemisphere 37.4
Hippocampus, CA3
nTPM: 40.2
2137 Male, age 80, left hemisphere 43.2
2436 Male, age 74, both hemispheres 42.2
1891 Female, age 85, both hemispheres 41.4
2620 Female, age 94, left hemisphere 40.2
1867 Male, age 76, both hemispheres 38.7
2861 Female, age 67, both hemispheres 35.8
Parahippocampal cortex
nTPM: 38.6
1990 Female, age 91, right hemisphere 40.9
2693 Female, age 94, both hemispheres 40.9
2692 Male, age 74, both hemispheres 40.4
2018 Male, age 76, both hemispheres 39.6
1850 Male, age 80, both hemispheres 38.7
2532 Female, age 72, left hemisphere 38.5
2250 Female, age 67, right hemisphere 38.3
1933 Female, age 85, both hemispheres 38.2
2245 Female, age 91, both hemispheres 36.6
2622 Female, age 67, right hemisphere 34.2
Perirhinal gyrus
nTPM: 39.0
2848 Male, age 76, right hemisphere 40.3
1841 Female, age 85, right hemisphere 40.2
2521 Female, age 94, right hemisphere 38.9
1794 Male, age 80, right hemisphere 38.8
1847 Female, age 91, left hemisphere 36.9
Subiculum
nTPM: 40.3
2729 Female, age 91, right hemisphere 43.0
1977 Female, age 85, both hemispheres 42.1
2042 Male, age 76, both hemispheres 41.3
2619 Male, age 74, both hemispheres 40.9
1901 Male, age 80, both hemispheres 39.7
2438 Female, age 94, left hemisphere 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.7
Samples: 197

Max nTPM: 60.9
Min nTPM: 22.3
Std nTPM: 6.4
Median nTPM: 37.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 60.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 55.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 55.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 53.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 51.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 51.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 51.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 50.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 50.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 49.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 49.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.8
FF:10169-103B7 60 years, female 59.6
FF:10153-102I9 76 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.0
Sample A Female 29.6
Sample B Female 21.6
Sample C Male 21.6
Sample D Male 20.0
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 23.9
Min nTPM: 17.3
Sample A Female 23.9
Sample B Female 18.8
Sample C Male 19.5
Sample D Male 17.3
Subiculum
nTPM: 20.9
Samples: 4

Max nTPM: 26.8
Min nTPM: 17.9
Sample A Female 26.8
Sample B Female 17.9
Sample C Male 18.4
Sample D Male 20.3
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 28.7
Min nTPM: 16.5
Sample A Female 25.5
Sample B Female 16.5
Sample C Male 28.7
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.8
Samples: 4

Max nTPM: 72.0
Min nTPM: 59.9
Sample A Male 61.2
Sample B Male 66.2
Sample C Female 72.0
Sample D Female 59.9
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 82.9
Min nTPM: 73.4
Sample A Male 74.0
Sample B Male 73.4
Sample C Female 82.9
Sample D Female 76.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
68148749 Antisense, RP_041116_02_B01, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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