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NBL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:147.1 nTPM
HPA:147.1 nTPM
GTEx:128.0 nTPM
FANTOM5:211.9 Scaled Tags Per Million
Pig:66.8 nTPM
Mouse:72.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007394Antibody CAB026132
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 147.1
Sample id Sample description nTPM
Hippocampus
nTPM: 144.0
1855 Male, age 76, left hemisphere 175.8
1898 Male, age 80, left hemisphere 158.8
2148 Female, age 91, left hemisphere 150.4
2621 Female, age 67, right hemisphere 140.8
1911 Female, age 85, right hemisphere 122.3
2529 Female, age 94, left hemisphere 116.0
Dentate gyrus
nTPM: 142.1
2010 Male, age 76, both hemispheres 169.6
2530 Female, age 94, left hemisphere 156.2
1927 Female, age 91, both hemispheres 153.6
2531 Female, age 67, both hemispheres 136.0
2246 Female, age 85, both hemispheres 121.6
2528 Male, age 74, both hemispheres 115.7
Entorhinal gyrus
nTPM: 118.0
2613 Female, age 94, left hemisphere 131.5
2764 Male, age 80, right hemisphere 130.0
1787 Male, age 76, left hemisphere 119.2
1938 Female, age 85, left hemisphere 116.4
2686 Male, age 75, right hemisphere 114.6
2117 Female, age 91, right hemisphere 96.2
Hippocampus, CA1
nTPM: 147.1
2749 Male, age 80, left hemisphere 178.5
2045 Male, age 76, both hemispheres 169.9
1873 Female, age 85, both hemispheres 157.9
2527 Male, age 74, both hemispheres 122.0
2082 Female, age 91, right hemisphere 107.0
Hippocampus, CA2
nTPM: 128.2
1892 Male, age 76, both hemispheres 165.5
1963 Male, age 80, left hemisphere 159.3
2437 Female, age 94, left hemisphere 133.7
2249 Male, age 74, both hemispheres 107.4
2113 Female, age 91, right hemisphere 104.4
1940 Female, age 85, left hemisphere 98.6
Hippocampus, CA3
nTPM: 143.1
2861 Female, age 67, both hemispheres 168.5
2137 Male, age 80, left hemisphere 156.4
2620 Female, age 94, left hemisphere 155.7
1867 Male, age 76, both hemispheres 150.1
1891 Female, age 85, both hemispheres 115.1
2436 Male, age 74, both hemispheres 112.5
Parahippocampal cortex
nTPM: 115.7
1850 Male, age 80, both hemispheres 124.1
2018 Male, age 76, both hemispheres 124.1
2245 Female, age 91, both hemispheres 122.7
2532 Female, age 72, left hemisphere 122.3
2622 Female, age 67, right hemisphere 118.4
1933 Female, age 85, both hemispheres 114.5
1990 Female, age 91, right hemisphere 109.5
2692 Male, age 74, both hemispheres 108.3
2693 Female, age 94, both hemispheres 106.6
2250 Female, age 67, right hemisphere 106.1
Perirhinal gyrus
nTPM: 118.2
1847 Female, age 91, left hemisphere 122.5
1794 Male, age 80, right hemisphere 122.1
2848 Male, age 76, right hemisphere 119.0
1841 Female, age 85, right hemisphere 118.2
2521 Female, age 94, right hemisphere 108.9
Subiculum
nTPM: 116.1
1901 Male, age 80, both hemispheres 121.2
2042 Male, age 76, both hemispheres 121.1
2729 Female, age 91, right hemisphere 118.6
2438 Female, age 94, left hemisphere 113.8
2619 Male, age 74, both hemispheres 112.0
1977 Female, age 85, both hemispheres 110.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 128.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.0
Samples: 197

Max nTPM: 252.4
Min nTPM: 28.3
Std nTPM: 49.0
Median nTPM: 130.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 252.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 247.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 235.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 233.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 231.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 226.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 220.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 213.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 210.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 206.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 205.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 211.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 211.9
FF:10169-103B7 60 years, female 251.1
FF:10153-102I9 76 years, female 172.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.8
Samples: 4

Max nTPM: 94.3
Min nTPM: 51.9
Sample A Female 94.3
Sample B Female 65.3
Sample C Male 51.9
Sample D Male 55.5
Entorhinal cortex
nTPM: 48.8
Samples: 4

Max nTPM: 59.0
Min nTPM: 35.1
Sample A Female 59.0
Sample B Female 44.4
Sample C Male 56.8
Sample D Male 35.1
Subiculum
nTPM: 52.8
Samples: 4

Max nTPM: 65.2
Min nTPM: 37.6
Sample A Female 62.7
Sample B Female 37.6
Sample C Male 45.8
Sample D Male 65.2
Ventral hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 68.4
Min nTPM: 35.5
Sample A Female 57.1
Sample B Female 35.5
Sample C Male 68.4
Sample D Male 59.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 54.9
Min nTPM: 47.6
Sample A Male 47.6
Sample B Male 48.2
Sample C Female 54.0
Sample D Female 54.9
Hippocampal formation
nTPM: 72.7
Samples: 4

Max nTPM: 94.2
Min nTPM: 61.6
Sample A Male 61.6
Sample B Male 69.0
Sample C Female 94.2
Sample D Female 66.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69782061 Antisense, RP_050505_02_C04, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

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