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C1QC
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:54.9 nTPM
HPA:54.9 nTPM
GTEx:47.0 nTPM
FANTOM5:213.0 Scaled Tags Per Million
Pig:53.3 nTPM
Mouse:58.5 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001471Antibody CAB009828
Glial cells Not detectedLow
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.9
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2621 Female, age 67, right hemisphere 79.7
1855 Male, age 76, left hemisphere 59.8
1898 Male, age 80, left hemisphere 58.5
1911 Female, age 85, right hemisphere 45.1
2148 Female, age 91, left hemisphere 43.5
2529 Female, age 94, left hemisphere 42.6
Dentate gyrus
nTPM: 45.1
2531 Female, age 67, both hemispheres 50.9
2010 Male, age 76, both hemispheres 45.8
2530 Female, age 94, left hemisphere 44.4
2528 Male, age 74, both hemispheres 44.2
1927 Female, age 91, both hemispheres 43.3
2246 Female, age 85, both hemispheres 42.1
Entorhinal gyrus
nTPM: 44.9
2117 Female, age 91, right hemisphere 59.4
1787 Male, age 76, left hemisphere 53.0
2613 Female, age 94, left hemisphere 43.3
2764 Male, age 80, right hemisphere 42.2
1938 Female, age 85, left hemisphere 38.8
2686 Male, age 75, right hemisphere 32.6
Hippocampus, CA1
nTPM: 42.5
2045 Male, age 76, both hemispheres 47.4
2082 Female, age 91, right hemisphere 46.7
1873 Female, age 85, both hemispheres 43.4
2527 Male, age 74, both hemispheres 39.4
2749 Male, age 80, left hemisphere 35.5
Hippocampus, CA2
nTPM: 50.2
1940 Female, age 85, left hemisphere 70.6
2437 Female, age 94, left hemisphere 52.6
1892 Male, age 76, both hemispheres 48.4
2113 Female, age 91, right hemisphere 48.4
1963 Male, age 80, left hemisphere 43.6
2249 Male, age 74, both hemispheres 37.8
Hippocampus, CA3
nTPM: 40.6
1867 Male, age 76, both hemispheres 52.4
2861 Female, age 67, both hemispheres 46.1
1891 Female, age 85, both hemispheres 43.2
2436 Male, age 74, both hemispheres 38.7
2137 Male, age 80, left hemisphere 35.5
2620 Female, age 94, left hemisphere 27.3
Parahippocampal cortex
nTPM: 49.5
2250 Female, age 67, right hemisphere 123.1
2018 Male, age 76, both hemispheres 54.8
2693 Female, age 94, both hemispheres 45.7
2245 Female, age 91, both hemispheres 44.3
1990 Female, age 91, right hemisphere 42.3
1850 Male, age 80, both hemispheres 39.2
2532 Female, age 72, left hemisphere 37.7
1933 Female, age 85, both hemispheres 36.8
2692 Male, age 74, both hemispheres 36.0
2622 Female, age 67, right hemisphere 35.0
Perirhinal gyrus
nTPM: 47.1
2521 Female, age 94, right hemisphere 65.8
2848 Male, age 76, right hemisphere 44.3
1841 Female, age 85, right hemisphere 42.7
1794 Male, age 80, right hemisphere 42.4
1847 Female, age 91, left hemisphere 40.2
Subiculum
nTPM: 48.9
2042 Male, age 76, both hemispheres 61.5
2729 Female, age 91, right hemisphere 59.1
2619 Male, age 74, both hemispheres 47.5
1901 Male, age 80, both hemispheres 44.9
2438 Female, age 94, left hemisphere 41.2
1977 Female, age 85, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.0
Samples: 197

Max nTPM: 695.4
Min nTPM: 2.7
Std nTPM: 68.2
Median nTPM: 27.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 695.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 379.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 298.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 240.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 210.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 192.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 189.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 184.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 156.5
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 142.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 133.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 213.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 213.0
FF:10153-102I9 76 years, female 239.9
FF:10169-103B7 60 years, female 186.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 62.8
Min nTPM: 31.6
Sample A Female 51.7
Sample B Female 34.3
Sample C Male 62.8
Sample D Male 31.6
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 26.6
Sample A Female 40.7
Sample B Female 48.1
Sample C Male 49.0
Sample D Male 26.6
Subiculum
nTPM: 53.3
Samples: 4

Max nTPM: 67.7
Min nTPM: 46.1
Sample A Female 67.7
Sample B Female 50.5
Sample C Male 48.9
Sample D Male 46.1
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 60.3
Min nTPM: 38.2
Sample A Female 38.2
Sample B Female 40.0
Sample C Male 60.3
Sample D Male 43.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.5
Samples: 4

Max nTPM: 62.9
Min nTPM: 55.0
Sample A Male 58.0
Sample B Male 55.0
Sample C Female 62.9
Sample D Female 58.2
Hippocampal formation
nTPM: 51.4
Samples: 4

Max nTPM: 54.6
Min nTPM: 47.8
Sample A Male 49.7
Sample B Male 47.8
Sample C Female 53.6
Sample D Female 54.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70430916 Antisense, RP_050614_02_D02, Mouse strain C57BL/6J (56 days, male) 2.2
77340474 Antisense, RP_070116_02_C12, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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