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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:13.7 nTPM
FANTOM5:32.9 Scaled Tags Per Million
Mouse:1.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001251Antibody HPA001551
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 15.4
1898 Male, age 80, left hemisphere 16.2
1855 Male, age 76, left hemisphere 15.8
2529 Female, age 94, left hemisphere 15.5
2148 Female, age 91, left hemisphere 15.3
1911 Female, age 85, right hemisphere 14.8
2621 Female, age 67, right hemisphere 14.8
Dentate gyrus
nTPM: 15.1
2010 Male, age 76, both hemispheres 16.6
2528 Male, age 74, both hemispheres 15.8
2530 Female, age 94, left hemisphere 14.9
2531 Female, age 67, both hemispheres 14.7
2246 Female, age 85, both hemispheres 14.5
1927 Female, age 91, both hemispheres 14.0
Entorhinal gyrus
nTPM: 14.3
2117 Female, age 91, right hemisphere 16.0
1787 Male, age 76, left hemisphere 14.9
1938 Female, age 85, left hemisphere 14.3
2686 Male, age 75, right hemisphere 13.9
2764 Male, age 80, right hemisphere 13.5
2613 Female, age 94, left hemisphere 12.8
Hippocampus, CA1
nTPM: 14.4
2527 Male, age 74, both hemispheres 15.0
1873 Female, age 85, both hemispheres 14.8
2082 Female, age 91, right hemisphere 14.7
2045 Male, age 76, both hemispheres 14.4
2749 Male, age 80, left hemisphere 13.2
Hippocampus, CA2
nTPM: 15.4
2249 Male, age 74, both hemispheres 18.6
1940 Female, age 85, left hemisphere 15.7
2113 Female, age 91, right hemisphere 15.1
2437 Female, age 94, left hemisphere 15.0
1963 Male, age 80, left hemisphere 14.6
1892 Male, age 76, both hemispheres 13.6
Hippocampus, CA3
nTPM: 14.6
2436 Male, age 74, both hemispheres 16.5
1891 Female, age 85, both hemispheres 14.7
1867 Male, age 76, both hemispheres 14.6
2620 Female, age 94, left hemisphere 14.3
2137 Male, age 80, left hemisphere 14.0
2861 Female, age 67, both hemispheres 13.8
Parahippocampal cortex
nTPM: 14.4
2250 Female, age 67, right hemisphere 16.3
2018 Male, age 76, both hemispheres 15.5
1990 Female, age 91, right hemisphere 14.6
2532 Female, age 72, left hemisphere 14.6
1850 Male, age 80, both hemispheres 14.3
1933 Female, age 85, both hemispheres 14.2
2245 Female, age 91, both hemispheres 13.8
2693 Female, age 94, both hemispheres 13.7
2622 Female, age 67, right hemisphere 13.6
2692 Male, age 74, both hemispheres 13.6
Perirhinal gyrus
nTPM: 14.7
2521 Female, age 94, right hemisphere 15.8
1841 Female, age 85, right hemisphere 15.2
1794 Male, age 80, right hemisphere 14.6
1847 Female, age 91, left hemisphere 13.9
2848 Male, age 76, right hemisphere 13.9
Subiculum
nTPM: 14.5
2729 Female, age 91, right hemisphere 16.3
2042 Male, age 76, both hemispheres 15.3
1901 Male, age 80, both hemispheres 14.5
2619 Male, age 74, both hemispheres 14.2
1977 Female, age 85, both hemispheres 13.6
2438 Female, age 94, left hemisphere 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 145.8
Min nTPM: 2.8
Std nTPM: 14.4
Median nTPM: 10.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 145.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 101.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 61.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 59.7
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 53.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 39.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 32.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 31.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 30.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.9
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Male 1.1
Sample B Male 1.0
Sample C Female 0.8
Sample D Female 0.7
Hippocampal formation
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.9
Sample A Male 0.9
Sample B Male 1.2
Sample C Female 1.4
Sample D Female 1.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70813896 Antisense, RP_050725_02_E08, Mouse strain C57BL/6J (56 days, male) 0.4
68191348 Antisense, RP_041129_01_A05, Mouse strain C57BL/6J (56 days, male) 0.3
77874604 Antisense, RP_070219_01_D01, Mouse strain C57BL/6J (56 days, male) 0.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.