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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:41.4 nTPM
HPA:41.4 nTPM
GTEx:25.7 nTPM
FANTOM5:0.2 Scaled Tags Per Million
Mouse:20.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001223
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.4
Sample id Sample description nTPM
Hippocampus
nTPM: 41.4
2529 Female, age 94, left hemisphere 52.4
2148 Female, age 91, left hemisphere 43.6
1911 Female, age 85, right hemisphere 39.6
2621 Female, age 67, right hemisphere 39.1
1898 Male, age 80, left hemisphere 38.4
1855 Male, age 76, left hemisphere 35.4
Dentate gyrus
nTPM: 38.6
2528 Male, age 74, both hemispheres 45.2
2530 Female, age 94, left hemisphere 40.1
2246 Female, age 85, both hemispheres 39.0
2531 Female, age 67, both hemispheres 37.0
2010 Male, age 76, both hemispheres 35.8
1927 Female, age 91, both hemispheres 34.3
Entorhinal gyrus
nTPM: 37.4
2117 Female, age 91, right hemisphere 40.7
2686 Male, age 75, right hemisphere 38.1
2613 Female, age 94, left hemisphere 37.1
2764 Male, age 80, right hemisphere 36.8
1938 Female, age 85, left hemisphere 36.3
1787 Male, age 76, left hemisphere 35.5
Hippocampus, CA1
nTPM: 39.5
2527 Male, age 74, both hemispheres 47.5
2082 Female, age 91, right hemisphere 39.4
1873 Female, age 85, both hemispheres 38.2
2045 Male, age 76, both hemispheres 38.1
2749 Male, age 80, left hemisphere 34.3
Hippocampus, CA2
nTPM: 38.4
2249 Male, age 74, both hemispheres 45.8
2113 Female, age 91, right hemisphere 41.9
1963 Male, age 80, left hemisphere 40.3
2437 Female, age 94, left hemisphere 39.0
1940 Female, age 85, left hemisphere 34.5
1892 Male, age 76, both hemispheres 29.2
Hippocampus, CA3
nTPM: 36.6
2861 Female, age 67, both hemispheres 40.0
2620 Female, age 94, left hemisphere 39.1
2436 Male, age 74, both hemispheres 38.7
1891 Female, age 85, both hemispheres 37.4
1867 Male, age 76, both hemispheres 33.5
2137 Male, age 80, left hemisphere 31.1
Parahippocampal cortex
nTPM: 35.7
2692 Male, age 74, both hemispheres 43.3
2250 Female, age 67, right hemisphere 38.1
1990 Female, age 91, right hemisphere 38.0
2622 Female, age 67, right hemisphere 37.1
2245 Female, age 91, both hemispheres 36.3
1850 Male, age 80, both hemispheres 33.7
1933 Female, age 85, both hemispheres 33.7
2532 Female, age 72, left hemisphere 33.7
2018 Male, age 76, both hemispheres 33.2
2693 Female, age 94, both hemispheres 30.3
Perirhinal gyrus
nTPM: 33.0
1847 Female, age 91, left hemisphere 35.5
2521 Female, age 94, right hemisphere 34.6
1794 Male, age 80, right hemisphere 33.8
2848 Male, age 76, right hemisphere 31.8
1841 Female, age 85, right hemisphere 29.2
Subiculum
nTPM: 39.5
2619 Male, age 74, both hemispheres 44.3
2729 Female, age 91, right hemisphere 41.8
2042 Male, age 76, both hemispheres 39.3
1901 Male, age 80, both hemispheres 37.3
1977 Female, age 85, both hemispheres 37.3
2438 Female, age 94, left hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 77.4
Min nTPM: 0.0
Std nTPM: 14.9
Median nTPM: 23.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 77.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 71.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 62.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 61.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 58.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 57.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 57.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 56.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 52.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 52.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.2
FF:10153-102I9 76 years, female 0.5
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 23.3
Min nTPM: 16.5
Sample A Male 22.0
Sample B Male 17.8
Sample C Female 23.3
Sample D Female 16.5
Hippocampal formation
nTPM: 20.3
Samples: 4

Max nTPM: 21.6
Min nTPM: 19.1
Sample A Male 19.6
Sample B Male 19.1
Sample C Female 21.6
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68341286 Antisense, RP_041207_01_C06, Mouse strain C57BL/6J (56 days, male) 2.5
1335 Antisense, RP_Baylor_253887, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.