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AGPAT3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.4 nTPM
HPA:38.4 nTPM
GTEx:38.8 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:64.2 nTPM
Mouse:113.8 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.4
Sample id Sample description nTPM
Hippocampus
nTPM: 38.4
2148 Female, age 91, left hemisphere 42.7
1898 Male, age 80, left hemisphere 41.2
2529 Female, age 94, left hemisphere 38.7
1855 Male, age 76, left hemisphere 37.4
2621 Female, age 67, right hemisphere 36.6
1911 Female, age 85, right hemisphere 33.8
Dentate gyrus
nTPM: 35.4
2528 Male, age 74, both hemispheres 39.2
2530 Female, age 94, left hemisphere 38.6
1927 Female, age 91, both hemispheres 34.8
2010 Male, age 76, both hemispheres 34.4
2246 Female, age 85, both hemispheres 33.6
2531 Female, age 67, both hemispheres 31.9
Entorhinal gyrus
nTPM: 33.0
2117 Female, age 91, right hemisphere 39.9
2764 Male, age 80, right hemisphere 33.7
2686 Male, age 75, right hemisphere 31.8
2613 Female, age 94, left hemisphere 31.5
1787 Male, age 76, left hemisphere 30.7
1938 Female, age 85, left hemisphere 30.2
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 43.4
1873 Female, age 85, both hemispheres 39.6
2527 Male, age 74, both hemispheres 36.1
2082 Female, age 91, right hemisphere 32.0
2045 Male, age 76, both hemispheres 26.4
Hippocampus, CA2
nTPM: 35.0
1963 Male, age 80, left hemisphere 46.9
1892 Male, age 76, both hemispheres 38.0
2113 Female, age 91, right hemisphere 34.9
2437 Female, age 94, left hemisphere 33.0
2249 Male, age 74, both hemispheres 30.0
1940 Female, age 85, left hemisphere 27.5
Hippocampus, CA3
nTPM: 36.1
2861 Female, age 67, both hemispheres 47.1
2620 Female, age 94, left hemisphere 43.6
2137 Male, age 80, left hemisphere 39.1
1891 Female, age 85, both hemispheres 31.4
1867 Male, age 76, both hemispheres 31.0
2436 Male, age 74, both hemispheres 24.7
Parahippocampal cortex
nTPM: 29.2
2692 Male, age 74, both hemispheres 34.0
2622 Female, age 67, right hemisphere 31.9
1990 Female, age 91, right hemisphere 31.5
2245 Female, age 91, both hemispheres 31.1
2250 Female, age 67, right hemisphere 29.2
1933 Female, age 85, both hemispheres 28.1
1850 Male, age 80, both hemispheres 28.0
2532 Female, age 72, left hemisphere 27.8
2693 Female, age 94, both hemispheres 27.1
2018 Male, age 76, both hemispheres 22.9
Perirhinal gyrus
nTPM: 27.6
1847 Female, age 91, left hemisphere 30.9
1794 Male, age 80, right hemisphere 30.2
2521 Female, age 94, right hemisphere 26.8
1841 Female, age 85, right hemisphere 25.8
2848 Male, age 76, right hemisphere 24.5
Subiculum
nTPM: 32.3
2729 Female, age 91, right hemisphere 38.9
2619 Male, age 74, both hemispheres 34.5
2438 Female, age 94, left hemisphere 32.3
1901 Male, age 80, both hemispheres 31.3
1977 Female, age 85, both hemispheres 30.1
2042 Male, age 76, both hemispheres 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.8
Samples: 197

Max nTPM: 62.6
Min nTPM: 14.2
Std nTPM: 7.7
Median nTPM: 38.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 62.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 62.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 60.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 57.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 55.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 54.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 54.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 53.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.1
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 74.6
Min nTPM: 48.2
Sample A Female 74.6
Sample B Female 61.7
Sample C Male 60.0
Sample D Male 48.2
Entorhinal cortex
nTPM: 64.2
Samples: 4

Max nTPM: 70.5
Min nTPM: 52.8
Sample A Female 64.0
Sample B Female 70.5
Sample C Male 69.6
Sample D Male 52.8
Subiculum
nTPM: 55.6
Samples: 4

Max nTPM: 73.6
Min nTPM: 48.1
Sample A Female 73.6
Sample B Female 51.3
Sample C Male 49.3
Sample D Male 48.1
Ventral hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 75.7
Min nTPM: 45.2
Sample A Female 58.5
Sample B Female 45.2
Sample C Male 75.7
Sample D Male 58.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.8
Samples: 4

Max nTPM: 118.1
Min nTPM: 109.0
Sample A Male 118.1
Sample B Male 112.7
Sample C Female 109.0
Sample D Female 115.5
Hippocampal formation
nTPM: 104.0
Samples: 4

Max nTPM: 108.9
Min nTPM: 97.2
Sample A Male 97.2
Sample B Male 103.6
Sample C Female 106.4
Sample D Female 108.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
85 Antisense, RP_Baylor_103163, Mouse strain C57BL/6J (56 days, male) 4.1
86 Antisense, RP_Baylor_103163, Mouse strain C57BL/6J (56 days, male) 0.0

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