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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.7 nTPM
HPA:59.7 nTPM
GTEx:50.4 nTPM
FANTOM5:108.0 Scaled Tags Per Million
Pig:48.2 nTPM
Mouse:83.7 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
2621 Female, age 67, right hemisphere 52.0
1898 Male, age 80, left hemisphere 49.2
2148 Female, age 91, left hemisphere 47.7
1855 Male, age 76, left hemisphere 44.0
2529 Female, age 94, left hemisphere 42.3
1911 Female, age 85, right hemisphere 40.0
Dentate gyrus
nTPM: 47.5
2531 Female, age 67, both hemispheres 59.8
1927 Female, age 91, both hemispheres 49.8
2246 Female, age 85, both hemispheres 47.7
2528 Male, age 74, both hemispheres 45.8
2530 Female, age 94, left hemisphere 42.1
2010 Male, age 76, both hemispheres 39.6
Entorhinal gyrus
nTPM: 55.0
2613 Female, age 94, left hemisphere 75.5
2764 Male, age 80, right hemisphere 61.1
1787 Male, age 76, left hemisphere 56.6
1938 Female, age 85, left hemisphere 55.4
2686 Male, age 75, right hemisphere 43.8
2117 Female, age 91, right hemisphere 37.4
Hippocampus, CA1
nTPM: 49.8
2749 Male, age 80, left hemisphere 65.5
2082 Female, age 91, right hemisphere 48.7
2527 Male, age 74, both hemispheres 46.7
2045 Male, age 76, both hemispheres 46.4
1873 Female, age 85, both hemispheres 41.9
Hippocampus, CA2
nTPM: 44.9
1892 Male, age 76, both hemispheres 48.8
2113 Female, age 91, right hemisphere 45.8
1963 Male, age 80, left hemisphere 45.6
1940 Female, age 85, left hemisphere 44.7
2437 Female, age 94, left hemisphere 44.2
2249 Male, age 74, both hemispheres 40.1
Hippocampus, CA3
nTPM: 53.5
2137 Male, age 80, left hemisphere 69.8
2620 Female, age 94, left hemisphere 63.7
2861 Female, age 67, both hemispheres 63.2
2436 Male, age 74, both hemispheres 44.5
1867 Male, age 76, both hemispheres 42.8
1891 Female, age 85, both hemispheres 37.0
Parahippocampal cortex
nTPM: 50.4
2245 Female, age 91, both hemispheres 56.7
1850 Male, age 80, both hemispheres 56.4
2622 Female, age 67, right hemisphere 54.8
2693 Female, age 94, both hemispheres 53.7
1933 Female, age 85, both hemispheres 52.7
1990 Female, age 91, right hemisphere 49.4
2532 Female, age 72, left hemisphere 48.8
2250 Female, age 67, right hemisphere 46.0
2018 Male, age 76, both hemispheres 42.9
2692 Male, age 74, both hemispheres 42.6
Perirhinal gyrus
nTPM: 59.7
1847 Female, age 91, left hemisphere 69.0
2521 Female, age 94, right hemisphere 62.4
1794 Male, age 80, right hemisphere 62.0
1841 Female, age 85, right hemisphere 52.9
2848 Male, age 76, right hemisphere 52.0
Subiculum
nTPM: 43.1
1977 Female, age 85, both hemispheres 49.8
2619 Male, age 74, both hemispheres 46.3
1901 Male, age 80, both hemispheres 44.9
2438 Female, age 94, left hemisphere 44.3
2729 Female, age 91, right hemisphere 39.3
2042 Male, age 76, both hemispheres 34.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.4
Samples: 197

Max nTPM: 118.9
Min nTPM: 11.1
Std nTPM: 15.2
Median nTPM: 50.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 118.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 84.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 79.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 79.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 78.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 76.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 76.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 75.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 74.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.0
FF:10153-102I9 76 years, female 108.2
FF:10169-103B7 60 years, female 107.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.5
Samples: 4

Max nTPM: 60.4
Min nTPM: 32.8
Sample A Female 60.4
Sample B Female 50.1
Sample C Male 46.7
Sample D Male 32.8
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 44.1
Min nTPM: 35.7
Sample A Female 44.0
Sample B Female 36.7
Sample C Male 44.1
Sample D Male 35.7
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 59.5
Min nTPM: 37.0
Sample A Female 59.5
Sample B Female 42.0
Sample C Male 47.5
Sample D Male 37.0
Ventral hippocampus
nTPM: 48.2
Samples: 4

Max nTPM: 60.7
Min nTPM: 33.8
Sample A Female 46.6
Sample B Female 33.8
Sample C Male 60.7
Sample D Male 51.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 79.3
Min nTPM: 66.2
Sample A Male 69.9
Sample B Male 66.2
Sample C Female 76.4
Sample D Female 79.3
Hippocampal formation
nTPM: 83.7
Samples: 4

Max nTPM: 89.8
Min nTPM: 76.2
Sample A Male 76.2
Sample B Male 86.2
Sample C Female 89.8
Sample D Female 82.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
72283569 Antisense, RP_051019_01_F06, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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