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S100A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:779.4 nTPM
HPA:779.4 nTPM
GTEx:588.5 nTPM
FANTOM5:502.1 Scaled Tags Per Million
Pig:1792.2 nTPM
Mouse:204.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006462Antibody CAB002599
Glial cells HighMedium
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 779.4
Sample id Sample description nTPM
Hippocampus
nTPM: 779.4
2529 Female, age 94, left hemisphere 794.7
1855 Male, age 76, left hemisphere 792.7
2148 Female, age 91, left hemisphere 784.2
1911 Female, age 85, right hemisphere 782.3
1898 Male, age 80, left hemisphere 767.1
2621 Female, age 67, right hemisphere 755.1
Dentate gyrus
nTPM: 733.1
2246 Female, age 85, both hemispheres 774.8
2010 Male, age 76, both hemispheres 765.8
2530 Female, age 94, left hemisphere 731.8
2528 Male, age 74, both hemispheres 716.8
1927 Female, age 91, both hemispheres 716.1
2531 Female, age 67, both hemispheres 693.5
Entorhinal gyrus
nTPM: 750.3
1938 Female, age 85, left hemisphere 786.8
2117 Female, age 91, right hemisphere 775.7
1787 Male, age 76, left hemisphere 763.1
2764 Male, age 80, right hemisphere 741.2
2686 Male, age 75, right hemisphere 730.4
2613 Female, age 94, left hemisphere 704.7
Hippocampus, CA1
nTPM: 765.3
2527 Male, age 74, both hemispheres 822.2
2082 Female, age 91, right hemisphere 755.4
1873 Female, age 85, both hemispheres 751.7
2045 Male, age 76, both hemispheres 750.9
2749 Male, age 80, left hemisphere 746.6
Hippocampus, CA2
nTPM: 746.8
2249 Male, age 74, both hemispheres 778.3
2113 Female, age 91, right hemisphere 764.3
1940 Female, age 85, left hemisphere 763.1
2437 Female, age 94, left hemisphere 731.7
1963 Male, age 80, left hemisphere 729.6
1892 Male, age 76, both hemispheres 713.9
Hippocampus, CA3
nTPM: 724.9
2137 Male, age 80, left hemisphere 745.2
1891 Female, age 85, both hemispheres 737.5
1867 Male, age 76, both hemispheres 733.4
2436 Male, age 74, both hemispheres 724.9
2861 Female, age 67, both hemispheres 722.5
2620 Female, age 94, left hemisphere 685.7
Parahippocampal cortex
nTPM: 772.4
2622 Female, age 67, right hemisphere 804.5
2692 Male, age 74, both hemispheres 795.3
1933 Female, age 85, both hemispheres 790.2
2018 Male, age 76, both hemispheres 787.9
2245 Female, age 91, both hemispheres 783.5
2250 Female, age 67, right hemisphere 783.5
2693 Female, age 94, both hemispheres 753.0
2532 Female, age 72, left hemisphere 748.8
1850 Male, age 80, both hemispheres 739.8
1990 Female, age 91, right hemisphere 736.9
Perirhinal gyrus
nTPM: 744.9
1794 Male, age 80, right hemisphere 761.6
1841 Female, age 85, right hemisphere 752.7
2521 Female, age 94, right hemisphere 748.1
1847 Female, age 91, left hemisphere 739.1
2848 Male, age 76, right hemisphere 723.0
Subiculum
nTPM: 772.7
2619 Male, age 74, both hemispheres 829.5
2729 Female, age 91, right hemisphere 775.5
2438 Female, age 94, left hemisphere 775.1
2042 Male, age 76, both hemispheres 774.6
1977 Female, age 85, both hemispheres 748.1
1901 Male, age 80, both hemispheres 733.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 588.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 588.5
Samples: 197

Max nTPM: 1435.8
Min nTPM: 169.2
Std nTPM: 258.3
Median nTPM: 537.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1435.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1254.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1217.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 1209.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1188.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1161.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1159.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 1157.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1136.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1123.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1110.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 502.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 502.1
FF:10153-102I9 76 years, female 543.9
FF:10169-103B7 60 years, female 460.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1792.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1745.5
Samples: 4

Max nTPM: 2397.6
Min nTPM: 935.5
Sample A Female 2397.6
Sample B Female 1484.5
Sample C Male 2164.2
Sample D Male 935.5
Entorhinal cortex
nTPM: 1456.8
Samples: 4

Max nTPM: 1863.9
Min nTPM: 1100.6
Sample A Female 1153.9
Sample B Female 1708.6
Sample C Male 1863.9
Sample D Male 1100.6
Subiculum
nTPM: 1555.2
Samples: 4

Max nTPM: 1986.6
Min nTPM: 1187.9
Sample A Female 1986.6
Sample B Female 1556.5
Sample C Male 1489.8
Sample D Male 1187.9
Ventral hippocampus
nTPM: 1792.2
Samples: 4

Max nTPM: 2246.8
Min nTPM: 1540.5
Sample A Female 1806.0
Sample B Female 1575.4
Sample C Male 2246.8
Sample D Male 1540.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 204.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.1
Samples: 4

Max nTPM: 214.7
Min nTPM: 193.4
Sample A Male 214.7
Sample B Male 195.1
Sample C Female 213.1
Sample D Female 193.4
Hippocampal formation
nTPM: 182.5
Samples: 4

Max nTPM: 209.4
Min nTPM: 164.2
Sample A Male 209.4
Sample B Male 164.2
Sample C Female 170.1
Sample D Female 186.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.