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UBE2Q1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.0 nTPM
HPA:36.0 nTPM
GTEx:27.0 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:39.4 nTPM
Mouse:81.4 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 36.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 35.2
2586 Male, age 75, left hemisphere 37.6
2666 Male, age 74, left hemisphere 37.0
1827 Male, age 72, unknown 36.2
2019 Male, age 18, unknown 35.5
1870 Female, age 42, unknown 35.3
2219 Male, age 76, both hemispheres 34.8
2411 Female, age 72, unknown 34.5
1833 Male, age 53, unknown 34.2
1830 Male, age 51, unknown 33.9
2828 Female, age 72, unknown 33.0
Dorsal raphe nucleus
nTPM: 34.1
1828 Male, age 53, unknown 34.7
2298 Female, age 72, unknown 34.2
2750 Male, age 76, both hemispheres 34.2
2047 Male, age 72, unknown 33.8
2016 Female, age 72, unknown 33.5
Inferior colliculus
nTPM: 35.3
2849 Male, age 72, unknown 35.8
2097 Female, age 72, unknown 35.7
1848 Female, age 42, unknown 35.0
1890 Male, age 53, unknown 34.7
Median raphe nucleus
nTPM: 35.6
2220 Male, age 76, midline 35.6
Pedunculopontine tegmental nucleus
nTPM: 35.3
2334 Male, age 80, both hemispheres 36.2
1921 Female, age 85, both hemispheres 35.3
2338 Male, age 61, both hemispheres 34.3
Periaquaductal grey, anterior
nTPM: 35.1
2502 Female, age 75, unknown 35.7
1947 Male, age 18, unknown 34.9
1795 Male, age 51, unknown 34.8
Periaquaductal grey, dorsal
nTPM: 34.0
1840 Male, age 53, unknown 35.0
2850 Male, age 76, both hemispheres 33.8
1831 Male, age 72, unknown 33.7
2464 Female, age 72, unknown 33.4
Periaquaductal grey, lateral
nTPM: 33.1
2053 Male, age 18, unknown 33.6
2140 Male, age 76, both hemispheres 33.1
2272 Male, age 74, both hemispheres 32.7
Pretectal area
nTPM: 36.0
1816 Male, age 51, unknown 39.0
1817 Female, age 42, unknown 38.9
1944 Female, age 72, unknown 38.0
2007 Male, age 72, unknown 37.8
1815 Male, age 53, unknown 36.8
2667 Female, age 75, unknown 35.7
2825 Male, age 18, unknown 35.0
2224 Female, age 72, unknown 34.7
2407 Male, age 75, both hemispheres 34.4
2316 Male, age 76, right hemisphere 32.9
2273 Male, age 74, both hemispheres 32.5
Red nucleus
nTPM: 34.7
1821 Female, age 72, unknown 36.6
2584 Male, age 75, left hemisphere 35.9
2785 Male, age 18, unknown 35.7
2725 Female, age 75, unknown 34.8
2588 Male, age 74, left hemisphere 34.7
2503 Female, age 72, unknown 34.6
1954 Female, age 42, unknown 34.5
1904 Male, age 53, unknown 34.2
2227 Male, age 72, unknown 34.0
2823 Male, age 76, right hemisphere 34.0
2769 Male, age 72, unknown 33.9
1865 Male, age 51, unknown 33.7
Substantia nigra
nTPM: 35.9
1916 Female, age 42, unknown 37.3
2665 Male, age 74, both hemispheres 37.1
1889 Female, age 72, unknown 36.9
2241 Male, age 72, unknown 36.9
1851 Male, age 51, unknown 36.6
2583 Male, age 75, right hemisphere 36.3
1941 Male, age 53, unknown 35.9
2699 Male, age 18, unknown 34.7
2409 Female, age 72, unknown 33.6
2590 Female, age 75, unknown 33.4
Superior colliculus
nTPM: 35.1
2668 Female, age 75, unknown 36.9
2087 Female, age 72, unknown 36.8
1895 Male, age 76, right hemisphere 36.1
1796 Male, age 53, unknown 35.5
2261 Male, age 18, unknown 35.2
1839 Male, age 51, unknown 34.8
2664 Male, age 75, both hemispheres 34.7
2587 Male, age 74, left hemisphere 34.3
1913 Female, age 42, unknown 33.5
1995 Male, age 72, unknown 33.0
Ventral tegmental area
nTPM: 34.8
2218 Male, age 76, both hemispheres 35.8
2410 Female, age 72, unknown 35.8
1915 Female, age 42, unknown 35.6
1942 Male, age 51, unknown 34.3
2021 Male, age 53, unknown 33.6
2223 Female, age 72, unknown 33.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 27.0
Samples: 139

Max nTPM: 44.7
Min nTPM: 16.7
Std nTPM: 5.1
Median nTPM: 26.6
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 44.7
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 40.7
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 40.5
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 39.6
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 38.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 37.9
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 36.7
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 36.2
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 35.9
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 35.9
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 35.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 17.5
FF:10158-103A5 76 years, female 17.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 39.4
Pig sample Sample description nTPM
Midbrain
nTPM: 36.1
Samples: 4

Max nTPM: 40.5
Min nTPM: 33.8
Sample A Female 33.8
Sample B Female 33.8
Sample C Male 40.5
Sample D Male 36.4
Periaqueductal gray
nTPM: 32.7
Samples: 3

Max nTPM: 37.3
Min nTPM: 28.1
Sample B Female 32.8
Sample C Male 37.3
Sample D Male 28.1
Substantia nigra
nTPM: 35.8
Samples: 4

Max nTPM: 51.4
Min nTPM: 24.2
Sample A Female 51.4
Sample B Female 29.5
Sample C Male 38.1
Sample D Male 24.2
Superior colliculi
nTPM: 39.4
Samples: 4

Max nTPM: 55.1
Min nTPM: 28.2
Sample A Female 55.1
Sample B Female 28.2
Sample C Male 37.9
Sample D Male 36.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 81.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 81.5
Samples: 4

Max nTPM: 83.6
Min nTPM: 78.7
Sample A Male 78.7
Sample B Male 79.9
Sample C Female 83.6
Sample D Female 83.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
69133857 Antisense, RP_050321_02_D05, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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