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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.0 nTPM
HPA:11.0 nTPM
GTEx:11.8 nTPM
FANTOM5:5.6 Scaled Tags Per Million
Pig:1.5 nTPM
Mouse:0.1 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016564Antibody HPA046859Antibody HPA063034Antibody CAB018662
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
2148 Female, age 91, left hemisphere 11.7
2529 Female, age 94, left hemisphere 11.3
1898 Male, age 80, left hemisphere 10.8
1911 Female, age 85, right hemisphere 10.7
2621 Female, age 67, right hemisphere 10.6
1855 Male, age 76, left hemisphere 10.5
Dentate gyrus
nTPM: 11.0
2530 Female, age 94, left hemisphere 12.2
2528 Male, age 74, both hemispheres 11.6
2246 Female, age 85, both hemispheres 11.4
2010 Male, age 76, both hemispheres 10.4
2531 Female, age 67, both hemispheres 10.3
1927 Female, age 91, both hemispheres 10.1
Entorhinal gyrus
nTPM: 10.5
2117 Female, age 91, right hemisphere 11.6
2686 Male, age 75, right hemisphere 11.6
2764 Male, age 80, right hemisphere 10.4
1787 Male, age 76, left hemisphere 10.3
2613 Female, age 94, left hemisphere 10.0
1938 Female, age 85, left hemisphere 9.3
Hippocampus, CA1
nTPM: 10.2
1873 Female, age 85, both hemispheres 11.4
2082 Female, age 91, right hemisphere 11.4
2527 Male, age 74, both hemispheres 10.5
2045 Male, age 76, both hemispheres 9.4
2749 Male, age 80, left hemisphere 8.3
Hippocampus, CA2
nTPM: 10.2
2113 Female, age 91, right hemisphere 11.3
2249 Male, age 74, both hemispheres 10.7
2437 Female, age 94, left hemisphere 10.5
1940 Female, age 85, left hemisphere 10.4
1963 Male, age 80, left hemisphere 9.9
1892 Male, age 76, both hemispheres 8.3
Hippocampus, CA3
nTPM: 10.2
2861 Female, age 67, both hemispheres 11.7
1891 Female, age 85, both hemispheres 10.7
2620 Female, age 94, left hemisphere 10.5
2137 Male, age 80, left hemisphere 9.9
2436 Male, age 74, both hemispheres 9.6
1867 Male, age 76, both hemispheres 8.8
Parahippocampal cortex
nTPM: 10.3
2622 Female, age 67, right hemisphere 11.2
2692 Male, age 74, both hemispheres 10.8
1990 Female, age 91, right hemisphere 10.7
2250 Female, age 67, right hemisphere 10.4
2532 Female, age 72, left hemisphere 10.2
2693 Female, age 94, both hemispheres 10.2
2018 Male, age 76, both hemispheres 10.1
1850 Male, age 80, both hemispheres 9.9
2245 Female, age 91, both hemispheres 9.8
1933 Female, age 85, both hemispheres 9.6
Perirhinal gyrus
nTPM: 9.3
1841 Female, age 85, right hemisphere 10.0
2848 Male, age 76, right hemisphere 9.4
2521 Female, age 94, right hemisphere 9.3
1847 Female, age 91, left hemisphere 9.0
1794 Male, age 80, right hemisphere 8.9
Subiculum
nTPM: 10.6
2729 Female, age 91, right hemisphere 12.7
2042 Male, age 76, both hemispheres 10.5
2438 Female, age 94, left hemisphere 10.5
1977 Female, age 85, both hemispheres 10.1
1901 Male, age 80, both hemispheres 9.9
2619 Male, age 74, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 36.9
Min nTPM: 2.6
Std nTPM: 5.2
Median nTPM: 11.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 36.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 32.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 26.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 23.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 23.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 21.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 21.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 20.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.6
FF:10153-102I9 76 years, female 9.2
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.3
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 1.3
Sample C Male 1.2
Sample D Male 1.7
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.7
Sample C Male 1.4
Sample D Male 1.9
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 1.5
Sample C Male 1.5
Sample D Male 1.7
Ventral hippocampus
nTPM: 1.4
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 2.2
Sample C Male 1.2
Sample D Male 1.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.2
Sample C Female 0.2
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70543064 Antisense, RP_050329_02_B08, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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