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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:261.1 nTPM
HPA:261.1 nTPM
GTEx:255.5 nTPM
FANTOM5:326.9 Scaled Tags Per Million
Pig:231.3 nTPM
Mouse:798.3 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036849
Glial cells Low
Neuronal cells High

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 261.1
Sample id Sample description nTPM
Hippocampus
nTPM: 213.8
1898 Male, age 80, left hemisphere 258.8
1855 Male, age 76, left hemisphere 224.9
2621 Female, age 67, right hemisphere 211.6
2148 Female, age 91, left hemisphere 201.1
2529 Female, age 94, left hemisphere 200.1
1911 Female, age 85, right hemisphere 186.6
Dentate gyrus
nTPM: 220.9
2010 Male, age 76, both hemispheres 243.8
1927 Female, age 91, both hemispheres 234.8
2530 Female, age 94, left hemisphere 232.0
2246 Female, age 85, both hemispheres 211.4
2531 Female, age 67, both hemispheres 205.9
2528 Male, age 74, both hemispheres 197.5
Entorhinal gyrus
nTPM: 222.3
2764 Male, age 80, right hemisphere 255.0
1938 Female, age 85, left hemisphere 239.6
1787 Male, age 76, left hemisphere 234.9
2613 Female, age 94, left hemisphere 224.8
2117 Female, age 91, right hemisphere 190.9
2686 Male, age 75, right hemisphere 188.4
Hippocampus, CA1
nTPM: 230.9
2749 Male, age 80, left hemisphere 282.4
2045 Male, age 76, both hemispheres 242.9
1873 Female, age 85, both hemispheres 225.8
2527 Male, age 74, both hemispheres 212.1
2082 Female, age 91, right hemisphere 191.2
Hippocampus, CA2
nTPM: 222.2
1892 Male, age 76, both hemispheres 269.5
1963 Male, age 80, left hemisphere 245.8
2437 Female, age 94, left hemisphere 216.9
1940 Female, age 85, left hemisphere 209.6
2249 Male, age 74, both hemispheres 202.7
2113 Female, age 91, right hemisphere 189.0
Hippocampus, CA3
nTPM: 215.8
1867 Male, age 76, both hemispheres 242.6
2137 Male, age 80, left hemisphere 235.9
2620 Female, age 94, left hemisphere 216.6
1891 Female, age 85, both hemispheres 206.3
2436 Male, age 74, both hemispheres 202.3
2861 Female, age 67, both hemispheres 191.3
Parahippocampal cortex
nTPM: 217.3
1850 Male, age 80, both hemispheres 275.0
1990 Female, age 91, right hemisphere 237.0
1933 Female, age 85, both hemispheres 226.4
2245 Female, age 91, both hemispheres 219.4
2018 Male, age 76, both hemispheres 212.2
2250 Female, age 67, right hemisphere 210.2
2532 Female, age 72, left hemisphere 209.5
2693 Female, age 94, both hemispheres 208.3
2692 Male, age 74, both hemispheres 188.3
2622 Female, age 67, right hemisphere 186.3
Perirhinal gyrus
nTPM: 261.1
1794 Male, age 80, right hemisphere 291.1
1847 Female, age 91, left hemisphere 288.9
1841 Female, age 85, right hemisphere 249.5
2521 Female, age 94, right hemisphere 239.7
2848 Male, age 76, right hemisphere 236.1
Subiculum
nTPM: 203.6
1977 Female, age 85, both hemispheres 233.3
1901 Male, age 80, both hemispheres 224.2
2438 Female, age 94, left hemisphere 195.3
2619 Male, age 74, both hemispheres 193.4
2042 Male, age 76, both hemispheres 189.3
2729 Female, age 91, right hemisphere 186.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 255.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 255.5
Samples: 197

Max nTPM: 623.9
Min nTPM: 136.5
Std nTPM: 88.5
Median nTPM: 231.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 623.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 532.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 490.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 486.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 481.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 441.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 436.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 435.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 423.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 423.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 421.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 326.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 326.9
FF:10169-103B7 60 years, female 416.4
FF:10153-102I9 76 years, female 237.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 231.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 231.4
Samples: 4

Max nTPM: 295.8
Min nTPM: 168.3
Sample A Female 295.8
Sample B Female 242.0
Sample C Male 219.3
Sample D Male 168.3
Entorhinal cortex
nTPM: 223.2
Samples: 4

Max nTPM: 247.5
Min nTPM: 179.6
Sample A Female 247.5
Sample B Female 240.9
Sample C Male 224.6
Sample D Male 179.6
Subiculum
nTPM: 203.7
Samples: 4

Max nTPM: 272.2
Min nTPM: 174.7
Sample A Female 272.2
Sample B Female 176.5
Sample C Male 191.5
Sample D Male 174.7
Ventral hippocampus
nTPM: 224.1
Samples: 4

Max nTPM: 281.2
Min nTPM: 151.9
Sample A Female 257.8
Sample B Female 151.9
Sample C Male 281.2
Sample D Male 205.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 798.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 798.4
Samples: 4

Max nTPM: 885.8
Min nTPM: 720.8
Sample A Male 720.8
Sample B Male 791.2
Sample C Female 795.7
Sample D Female 885.8
Hippocampal formation
nTPM: 748.1
Samples: 4

Max nTPM: 818.9
Min nTPM: 708.9
Sample A Male 818.9
Sample B Male 708.9
Sample C Female 740.1
Sample D Female 724.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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