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PAQR4
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.1 nTPM
HPA:55.1 nTPM
GTEx:61.1 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Mouse:37.5 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.1
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1911 Female, age 85, right hemisphere 52.7
1898 Male, age 80, left hemisphere 50.3
1855 Male, age 76, left hemisphere 49.3
2621 Female, age 67, right hemisphere 48.6
2529 Female, age 94, left hemisphere 46.8
2148 Female, age 91, left hemisphere 46.2
Dentate gyrus
nTPM: 50.7
2530 Female, age 94, left hemisphere 63.1
2528 Male, age 74, both hemispheres 54.2
2010 Male, age 76, both hemispheres 51.0
2246 Female, age 85, both hemispheres 46.7
2531 Female, age 67, both hemispheres 46.6
1927 Female, age 91, both hemispheres 42.7
Entorhinal gyrus
nTPM: 52.8
2117 Female, age 91, right hemisphere 62.3
2764 Male, age 80, right hemisphere 57.5
2613 Female, age 94, left hemisphere 54.9
1787 Male, age 76, left hemisphere 50.5
1938 Female, age 85, left hemisphere 46.7
2686 Male, age 75, right hemisphere 45.3
Hippocampus, CA1
nTPM: 44.6
1873 Female, age 85, both hemispheres 48.6
2527 Male, age 74, both hemispheres 46.1
2082 Female, age 91, right hemisphere 44.0
2749 Male, age 80, left hemisphere 43.7
2045 Male, age 76, both hemispheres 40.6
Hippocampus, CA2
nTPM: 49.7
1963 Male, age 80, left hemisphere 57.1
2249 Male, age 74, both hemispheres 51.4
2437 Female, age 94, left hemisphere 50.4
1940 Female, age 85, left hemisphere 48.9
2113 Female, age 91, right hemisphere 45.5
1892 Male, age 76, both hemispheres 45.0
Hippocampus, CA3
nTPM: 45.5
1891 Female, age 85, both hemispheres 54.9
1867 Male, age 76, both hemispheres 46.6
2620 Female, age 94, left hemisphere 44.2
2861 Female, age 67, both hemispheres 43.7
2436 Male, age 74, both hemispheres 42.8
2137 Male, age 80, left hemisphere 40.6
Parahippocampal cortex
nTPM: 46.6
2692 Male, age 74, both hemispheres 55.2
2532 Female, age 72, left hemisphere 51.7
1990 Female, age 91, right hemisphere 50.4
1850 Male, age 80, both hemispheres 46.4
2018 Male, age 76, both hemispheres 46.4
1933 Female, age 85, both hemispheres 45.5
2245 Female, age 91, both hemispheres 44.8
2693 Female, age 94, both hemispheres 44.2
2622 Female, age 67, right hemisphere 41.9
2250 Female, age 67, right hemisphere 39.6
Perirhinal gyrus
nTPM: 42.1
1794 Male, age 80, right hemisphere 43.5
2848 Male, age 76, right hemisphere 43.5
2521 Female, age 94, right hemisphere 42.4
1847 Female, age 91, left hemisphere 41.0
1841 Female, age 85, right hemisphere 40.2
Subiculum
nTPM: 55.1
2042 Male, age 76, both hemispheres 65.3
1901 Male, age 80, both hemispheres 61.1
1977 Female, age 85, both hemispheres 54.2
2619 Male, age 74, both hemispheres 52.4
2729 Female, age 91, right hemisphere 49.1
2438 Female, age 94, left hemisphere 48.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.1
Samples: 197

Max nTPM: 255.4
Min nTPM: 11.6
Std nTPM: 31.0
Median nTPM: 55.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 255.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 174.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 160.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 152.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 136.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 132.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 131.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 116.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 115.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 113.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 113.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.7
FF:10153-102I9 76 years, female 29.5
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 41.2
Min nTPM: 33.2
Sample A Male 41.2
Sample B Male 35.3
Sample C Female 33.2
Sample D Female 35.4
Hippocampal formation
nTPM: 37.5
Samples: 4

Max nTPM: 43.5
Min nTPM: 32.1
Sample A Male 32.1
Sample B Male 37.7
Sample C Female 43.5
Sample D Female 36.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
248335 Antisense, RP_040526_01_A03, Mouse strain C57BL/6J (56 days, male) 2.8
77620369 Antisense, RP_070205_01_D04, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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