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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:85.8 nTPM
HPA:85.8 nTPM
GTEx:96.1 nTPM
FANTOM5:115.2 Scaled Tags Per Million
Pig:45.3 nTPM
Mouse:116.6 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012669
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.8
Sample id Sample description nTPM
Hippocampus
nTPM: 85.3
2529 Female, age 94, left hemisphere 87.2
1898 Male, age 80, left hemisphere 86.7
2621 Female, age 67, right hemisphere 85.9
2148 Female, age 91, left hemisphere 84.8
1911 Female, age 85, right hemisphere 84.1
1855 Male, age 76, left hemisphere 82.9
Dentate gyrus
nTPM: 85.2
2530 Female, age 94, left hemisphere 92.7
2010 Male, age 76, both hemispheres 85.1
2246 Female, age 85, both hemispheres 85.1
2531 Female, age 67, both hemispheres 84.4
2528 Male, age 74, both hemispheres 82.5
1927 Female, age 91, both hemispheres 81.4
Entorhinal gyrus
nTPM: 85.8
2117 Female, age 91, right hemisphere 87.7
2764 Male, age 80, right hemisphere 87.7
1787 Male, age 76, left hemisphere 86.6
1938 Female, age 85, left hemisphere 85.7
2686 Male, age 75, right hemisphere 84.5
2613 Female, age 94, left hemisphere 82.2
Hippocampus, CA1
nTPM: 84.4
2749 Male, age 80, left hemisphere 86.1
2045 Male, age 76, both hemispheres 85.2
1873 Female, age 85, both hemispheres 84.4
2527 Male, age 74, both hemispheres 84.2
2082 Female, age 91, right hemisphere 82.2
Hippocampus, CA2
nTPM: 84.0
1892 Male, age 76, both hemispheres 85.5
2437 Female, age 94, left hemisphere 85.0
1963 Male, age 80, left hemisphere 84.9
1940 Female, age 85, left hemisphere 84.7
2113 Female, age 91, right hemisphere 83.9
2249 Male, age 74, both hemispheres 79.8
Hippocampus, CA3
nTPM: 82.9
2861 Female, age 67, both hemispheres 85.6
1867 Male, age 76, both hemispheres 84.7
1891 Female, age 85, both hemispheres 83.4
2137 Male, age 80, left hemisphere 82.1
2436 Male, age 74, both hemispheres 81.2
2620 Female, age 94, left hemisphere 80.0
Parahippocampal cortex
nTPM: 83.4
2532 Female, age 72, left hemisphere 87.4
2018 Male, age 76, both hemispheres 86.1
2245 Female, age 91, both hemispheres 85.9
1850 Male, age 80, both hemispheres 83.4
2250 Female, age 67, right hemisphere 83.0
1933 Female, age 85, both hemispheres 82.8
2622 Female, age 67, right hemisphere 82.8
2692 Male, age 74, both hemispheres 82.8
1990 Female, age 91, right hemisphere 81.5
2693 Female, age 94, both hemispheres 78.2
Perirhinal gyrus
nTPM: 83.2
1794 Male, age 80, right hemisphere 85.3
1847 Female, age 91, left hemisphere 83.3
2848 Male, age 76, right hemisphere 82.8
1841 Female, age 85, right hemisphere 82.6
2521 Female, age 94, right hemisphere 82.1
Subiculum
nTPM: 85.0
2438 Female, age 94, left hemisphere 89.5
2042 Male, age 76, both hemispheres 85.3
1901 Male, age 80, both hemispheres 85.1
1977 Female, age 85, both hemispheres 84.8
2619 Male, age 74, both hemispheres 83.1
2729 Female, age 91, right hemisphere 81.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 96.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.1
Samples: 197

Max nTPM: 162.1
Min nTPM: 58.8
Std nTPM: 18.9
Median nTPM: 91.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 162.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 156.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 156.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 154.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 153.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 141.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 136.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 135.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 134.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 131.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 130.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.2
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 109.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.3
Samples: 4

Max nTPM: 62.4
Min nTPM: 32.8
Sample A Female 62.4
Sample B Female 40.9
Sample C Male 45.2
Sample D Male 32.8
Entorhinal cortex
nTPM: 38.6
Samples: 4

Max nTPM: 45.6
Min nTPM: 30.7
Sample A Female 37.6
Sample B Female 45.6
Sample C Male 40.5
Sample D Male 30.7
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 49.7
Min nTPM: 29.3
Sample A Female 49.7
Sample B Female 31.5
Sample C Male 30.8
Sample D Male 29.3
Ventral hippocampus
nTPM: 40.3
Samples: 4

Max nTPM: 47.5
Min nTPM: 28.3
Sample A Female 41.8
Sample B Female 28.3
Sample C Male 47.5
Sample D Male 43.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.0
Samples: 4

Max nTPM: 108.2
Min nTPM: 90.2
Sample A Male 108.2
Sample B Male 107.9
Sample C Female 101.7
Sample D Female 90.2
Hippocampal formation
nTPM: 116.7
Samples: 4

Max nTPM: 122.8
Min nTPM: 108.2
Sample A Male 122.1
Sample B Male 108.2
Sample C Female 122.8
Sample D Female 113.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
71992097 Antisense, RP_051012_04_B07, Mouse strain C57BL/6J (56 days, male) 10.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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